Gene Rpic_4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4876 
Symbol 
ID6285725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1223956 
End bp1224303 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content62% 
IMG OID642619352 
Producthypothetical protein 
Protein accessionYP_001893387 
Protein GI187927042 
COG category[S] Function unknown 
COG ID[COG5605] Predicted small integral membrane protein 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0975253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA CCGACCCTTC CTCCAAGCCG GCTGCGCCCG ACGCACACGG ACAGCAGCAC 
AGCATCAGCG TCTACCTGAA GATCTGGGGC CTGCTGTTCG TGCTCAGCAC GCTGTCGTAC
CTGGTGGATT ACTTTCGCGT GGAAGGGCTG ACGCGCTGGG TGCTGATCGT CGCGCTGATG
ATCGCCAAGG CGGGGCTGAT CGTCTCGGTG TTCATGCACC TGATGTGGGA GCGGCTGGCG
CTGGTGTATG CCATTCTCAT GCCGCCCCTG GCACTGCTGG TGCTGATGGT GCTGATGGCC
GCGGAAGCGC ATCACACGTT TGCAATGCGC ACCCTCTTCT TCCACTGA
 
Protein sequence
MDHTDPSSKP AAPDAHGQQH SISVYLKIWG LLFVLSTLSY LVDYFRVEGL TRWVLIVALM 
IAKAGLIVSV FMHLMWERLA LVYAILMPPL ALLVLMVLMA AEAHHTFAMR TLFFH