Gene Rpic_4874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4874 
Symbol 
ID6285724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1222651 
End bp1223259 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID642619350 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001893385 
Protein GI187927040 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.108668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC TGCCCCGCCC GTTCATGGCA GATCTGCCAC CTGCCATGCC CAGCGCCGGC 
CGCATCGGCT TGCGCGTCTT CATGGCCGTG GTGACGGCGT TGTTCTCGCT CTTGATCCTT
GCCTACGCGA TGCGCATGCG CGAGGCCGAC TGGCTGCCCG TTCCTCGGCC AGTGCTGCTT
TGGTGGAACA CCGGCGTGCT GGCACTGGCC TGCGCGGCAA TGGAGATCGC ACGGCGGGCG
CGCACCGGCC GCACGCCATG GCTGCTGTCC GGCGGAGGAC TTGCCTCGTG GTTCGTCATC
GGGCAGTGGA TGGTGTGGCA GCAGCTCTCC GCCCACGGGC AAGGCGTGGC GGTCAACCCG
TCCGATAGCT TCCTGTATGT ATTCACCGGC CTGCATGCGG CACACGTGAT GGGTGGCATC
GTTGTCCTGG CCGCGACGAT CGTGCGCCAG CACAGCCACC CGGATCACAC CCTGCCTGCC
GTCGCGCTGT GCGCGGCCTA CTGGCACTTC CTGCTGATCG TATGGCTCGC GCTGCTGGCC
GCCATGTGGT GGATCACGCC TGCATTCGTC GCCGCGATCT GCGGGCCGTC TTATGGAGCC
ACACCATGA
 
Protein sequence
MTTLPRPFMA DLPPAMPSAG RIGLRVFMAV VTALFSLLIL AYAMRMREAD WLPVPRPVLL 
WWNTGVLALA CAAMEIARRA RTGRTPWLLS GGGLASWFVI GQWMVWQQLS AHGQGVAVNP
SDSFLYVFTG LHAAHVMGGI VVLAATIVRQ HSHPDHTLPA VALCAAYWHF LLIVWLALLA
AMWWITPAFV AAICGPSYGA TP