| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4868 |
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| Symbol | |
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| ID | 6285714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1215981 |
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| End bp | 1217819 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642619344 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001893379 |
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| Protein GI | 187927034 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase
[TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.192986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCGC AACGCCTGCA CGACGTCGTG GCCGACGTCA CCCAGCGCAT CATCGACCGC
AGCCGCGGCC CTCGCCAAGC CTATCTGGAT GTCACGCGCA AGAACGCCGG CCGCAAGGTC
GAGCGCACGC TGCTGTCCTG CACGAACCTC GCCCACGGTT TTGCCGCCAT GCCGGGCGAG
GCGAAGATCC GCCTGAAGGC GCTGGAGCGG CCGAACATCG GCATCGTGTC GGCATATAAC
GACATGCTGT CCGCCCACCA GCCGCTGGAC GTCTTCCCGG CGTGGATCAA GGAAACCGCC
CTGGAAGCCG GCGGCACCGC GCAATTTGCG GGCGGCGTGC CAGCCATGTG CGATGGCGTG
ACGCAGGGCC AGGACGGCAT GGAGCTGTCG CTCTTCTCGC GTGACACGAT CGCACTGTCG
ACCGCCGTGG CGCTGTCGCA CCAGATGTTC GATGCGGCGC TGTACCTGGG CGTCTGCGAC
AAGATCGTGC CGGGCCTGGT GATCGGCGCC CTGTCGTTCG GCCACCTGCC GGCCATATTC
GTGCCCGCCG GCCCGATGAC CACCGGCATC AGCAACGATG AAAAAGCCCG CACGCGCCAG
CTCTATGCCG AGGGCAAGCT CTCGCGCGCC GACCTGCTGG AAGCGGAATC CAAGTCGTAC
CACGGCCCCG GCACCTGCAC GTTCTACGGC ACAGCCAACT CCAACCAGAT GCTGATGGAG
ATCATGGGCC TGCACCTGCC GGGCACCGCC TTCATCAACC CGAACACGCC GCTGCGTGAA
GCGCTCACGC GGGAATCCGC GCGTCAGGCG CTCAGGCTGG TGTACAGCGG CACGCAATAC
ACGCCGATCG CTGACGTGCT GGACGAGCGC GCCTTCGTCA ATGGGATCGT CGGCCTGCTC
GCCACGGGTG GCTCGACCAA CCACACGCTG CACCTCATCG CCATGGCACG CGCCGCGGGC
ATCCTGCTCA CGTGGGATGA CTTCCATGAC CTGTCGGGCG TGATTCCGCT GCTCGCACGC
GTGTACCCGA ACGGCAAGGC CGATGTGAAC GAGTTCCAGG CTGCGGGCGG CCTGTCGATC
GTGATTCGCG AGCTGCTCGA TGCGGGCCTG CTACACGAAG ACGTCACGAC GATCATGGGC
AAGGGCCTGC GCCGCCACGC GCAGGAGCCC TTCCTGGACA ACGGCAAGGT GGTGTGGCGC
GACGGCGCTG CGGCCTCGCT CGACACGAAC ATCGTGCGCG GCGTGGTCGA ACCCTTCTCG
CCGGATGGCG GCCTGCGCGT GCTGCACGGC AACCTCGGCC GCTCGGTCAT CAAGGTATCG
GCCGTCAAGC CGGAGCATCG CTTTGTCGAG GCGCCGGCGC GGGTCTTCCA CGCCCAGGAC
GACCTCATCC ACGCCTTCAA GGCGGGCGAG CTGGAACGCG ATTTCGTGGC CGTGCTGCCG
TATCAGGGCC CGGCCGCCAA CGGCATGCCG GAGTTGCACA AGCTGACGCC GACGCTGTCG
GTGCTGCAGG AGCGGGGCTT CAAGGTGGCG CTGGTGACGG ATGGCCGCAT GTCCGGCGCC
TCGGGCAAGG TGCCGGCGGC CATTCACATC ACGCCGGAAG CGCTCAACGG CGGGCCGCTG
GCACGCGTGC GCGATGGCGA TATCGTCGTG CTGGATGCCG AGGCGGGCAC GCTGTCGGTG
CGTGTGCCGG AGGCGGAATG GAACGCCCGG CAGGTCAGCG TGCCGGACCT GGCGCACTAC
CACGCGGGCG TTGGGCGGGA CCTGTTCTCG GGCTTCCGCC GCAATGTGTC CGCGGCGGAA
GAAGGCGCCT GCACGTTGTT CGTATCCGCA GGCGCCTGA
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| Protein sequence | MAPQRLHDVV ADVTQRIIDR SRGPRQAYLD VTRKNAGRKV ERTLLSCTNL AHGFAAMPGE
AKIRLKALER PNIGIVSAYN DMLSAHQPLD VFPAWIKETA LEAGGTAQFA GGVPAMCDGV
TQGQDGMELS LFSRDTIALS TAVALSHQMF DAALYLGVCD KIVPGLVIGA LSFGHLPAIF
VPAGPMTTGI SNDEKARTRQ LYAEGKLSRA DLLEAESKSY HGPGTCTFYG TANSNQMLME
IMGLHLPGTA FINPNTPLRE ALTRESARQA LRLVYSGTQY TPIADVLDER AFVNGIVGLL
ATGGSTNHTL HLIAMARAAG ILLTWDDFHD LSGVIPLLAR VYPNGKADVN EFQAAGGLSI
VIRELLDAGL LHEDVTTIMG KGLRRHAQEP FLDNGKVVWR DGAAASLDTN IVRGVVEPFS
PDGGLRVLHG NLGRSVIKVS AVKPEHRFVE APARVFHAQD DLIHAFKAGE LERDFVAVLP
YQGPAANGMP ELHKLTPTLS VLQERGFKVA LVTDGRMSGA SGKVPAAIHI TPEALNGGPL
ARVRDGDIVV LDAEAGTLSV RVPEAEWNAR QVSVPDLAHY HAGVGRDLFS GFRRNVSAAE
EGACTLFVSA GA
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