| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4772 |
|---|
| Symbol | |
|---|
| ID | 6285376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 1110053 |
|---|
| End bp | 1110526 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642619248 |
|---|
| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ |
|---|
| Protein accession | YP_001893283 |
|---|
| Protein GI | 187926938 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CCGAACTCTG CGCCTTGCCG ATCGAATCCA TCCTGCCCCA TCGCGGCAGC
ATGCTGCTGC TCTCGCGCGT GGACACCTGG GACGAAGAAT CGATCGCAGC GGCCGCCGAC
CTTGATCCGG CTGCCTGGTA TGCCGACGCG AACGGCAACA TGCCCGCGTG GATCGGCATC
GAACTCATGG CGCAGGCCAT TGCCGCCCAC GTCGGTTTGC TGTCGATGCG AGAGGGCAAG
CCGGCGCGGC CCGGCGTGCT CCTGGGATCT CGCAAGTACG AGACGAGCGT GCCGACGTTC
CCGCCAGTCC AGCCATTGCG TGTGGAAGCG CGTGAACTGC TGCGCAGCGC CGAGGGTCAT
GGCGCCTACG CGTGCACAAT CAGCACTGCT GGGCAGAACC TGGCCACCGC CGTCATCAAG
GTGTATCAGC CGACCGATTT CGAAGCATTC ATTGAAGGGA GCCTCACGAC ATGA
|
|---|
| Protein sequence | MTDAELCALP IESILPHRGS MLLLSRVDTW DEESIAAAAD LDPAAWYADA NGNMPAWIGI
ELMAQAIAAH VGLLSMREGK PARPGVLLGS RKYETSVPTF PPVQPLRVEA RELLRSAEGH
GAYACTISTA GQNLATAVIK VYQPTDFEAF IEGSLTT
|
|---|
| |