Gene Rpic_4702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4702 
Symbol 
ID6285935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1046001 
End bp1046435 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content67% 
IMG OID642619178 
Producthistidine triad (HIT) protein 
Protein accessionYP_001893213 
Protein GI187926868 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00557305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGACG CGACGTACGA CAACCAGAAC ATCTTCGCCA AGATCCTGCG CGGCGAGCTG 
CCCTGCATCA AGGTGTACGA AGACGAGCAC ACCATCGCCT TCATGGACAT CATGCCGCAG
GCCGACGGCC ATGTTCTCGT GCTGCCCAAG GAGGGCGCGG CACTGTTGTT CGACCTGTCC
GACGAAGCCG CATCGGCCGC CATCCGCACC ACGCGCAAGC TGGCCCGCGC CGTGCGCGAC
GCGTTCGCGC CGCCGGGCGT TGCCGTCTTC CAGCTGAACG GCGCGGCCGC CGGCCAGACC
GTGCCGCACG TGCACTTCCA CGTGCTGCCC CGCTACAGCG ATACTCCGCT GCAACCGCAC
GCCCGCGTGC AGGCCGATAC CGACAAGCTC AAGGCCCACG CCGAGAAGAT CATCGCCGCC
CTGCAAGCCG AGTAA
 
Protein sequence
MPDATYDNQN IFAKILRGEL PCIKVYEDEH TIAFMDIMPQ ADGHVLVLPK EGAALLFDLS 
DEAASAAIRT TRKLARAVRD AFAPPGVAVF QLNGAAAGQT VPHVHFHVLP RYSDTPLQPH
ARVQADTDKL KAHAEKIIAA LQAE