| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4505 |
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| Symbol | |
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| ID | 6285768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 834663 |
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| End bp | 835472 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642618986 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001893022 |
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| Protein GI | 187926677 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.15196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.998314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CGATGATCGA CCTGACTGGC AAGACGGCTG TCGTGACGGG TGGCTCCTCC
GGCATCGGCC TGGCCACCGT TGAACTGCTG CTGGAAGCCG GCGCTGTCGT GGCGCTGTGC
GGGCGCAATG CCGAACGCCT CGCGCAAGCC GAACAAGGTC TGCGCAGCCG CTTCCCAAAC
GCCCGGCTGT TTGCCGCAAC GTGCGACGTG CTCGACGCCG CGCAGATGGC AGCGTTTGCC
GACGCCGTGG AGCAAGCCCT CGGCCCCGTC GACATGCTGG TCAACAACGC GGGCCAAGGC
CGTGTCTCGA CGTTTGCCGA TACCGACGAT GCCGCGTGGA CGCAGGAGCT GCATCTCAAG
TTCTTCTCCG TGATCCATCC CACGCGCGCT TTCCTGCCGC AACTCGAGCG CTCGGAGCAC
GGCGCGATCG TCTGCGTGAA TTCGCTGCTC GCGCAGCAGC CCGAGCCGCA CATGGTCGCC
ACCTCGGCTG CGCGTGCGGG TGTGCTCAAT CTTGTGCGTT CGATGGCGAC CGAATTTGCA
CCGAAGGGCG TGCGCGTCAA CGGCATCCTG ATCGGCCTGG TGGAGTCCGG CCAATGGCGC
CGCCGCTTCG AGGCACGACC TGAAGAAGAC CGCCATCTCG ACTGGGCCGC ATGGACGCGC
CGCCTGGCCA CGCAAAAACA TATTCCCCTT GGACGCCTGG GCCTGCCCGA AGAGGCTGCC
CGCGCCATTC TGTTCCTTGC CTCGCCGTTG TCTTCGTACA CCACGGGCAG CCACATCGAT
ATCTCCGGAG GACACTCCCG TCATGCTTAA
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| Protein sequence | MTMPMIDLTG KTAVVTGGSS GIGLATVELL LEAGAVVALC GRNAERLAQA EQGLRSRFPN
ARLFAATCDV LDAAQMAAFA DAVEQALGPV DMLVNNAGQG RVSTFADTDD AAWTQELHLK
FFSVIHPTRA FLPQLERSEH GAIVCVNSLL AQQPEPHMVA TSAARAGVLN LVRSMATEFA
PKGVRVNGIL IGLVESGQWR RRFEARPEED RHLDWAAWTR RLATQKHIPL GRLGLPEEAA
RAILFLASPL SSYTTGSHID ISGGHSRHA
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