Gene Rpic_4501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4501 
Symbol 
ID6285750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp829577 
End bp830539 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content65% 
IMG OID642618982 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001893018 
Protein GI187926673 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.183527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.639433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA TTCGAGGCAT CGACGAAATC GTCTACGGTG CCGACGACCT CGCCGCCTGC 
AAGCAGTTCT TCCTGGATTG GGGCCTTGCC CTGCAATCGG AAGACGCCAG CGGCCTGCTG
TTCGAAACGC TCAACGGCTG CCGCGTGCGC GTCAAGCGCA GGGACGATGC CACGCTGCCG
GCCGCCATGG AAGCCGGCCC GACGCTGTGC GAGGTGATCT GGGGCACCGA TTCGCAGGCT
GTGCTCGATC GCCTGGTCGA CAAACTGGCT GACCAGCCCG GTTATGTGCA CGCCGACGGC
CGCGTCGGCT GCACCGACCC GAACGGCCTG GCAGTGCGCG TGCAACTGAC CACCAAGCGC
GATGTCGACG TGCAATGCGC AGCCATGAAC ACATGGACGG ACAAACCGCG CCGCAATCAA
CCGAGCCCGA TCTACGCGCG TGCCACGCCC ATCGAAGTGG GCCACGTGGT CTTCTTCGTG
AAGGACGTGG CGGCCACGGA GCGCTTTTAC ATCGACAAGC TCGGCTTTGT GCCGTCCGAC
CACTACCCGG GCCGCGGGGC GTTCCTGCGC TGTGAGCCGG AAGGCGGCCA TCACGATCTG
TTCCTGCTGC AAACGCCGCA GGCGAAGAGC GGGCTCAACC ACGTCGCCTT CACCGTGCGC
GACATCCACG AAGTGTTCGG CGGTGGCATG CATGTGTCGC GCTGCGGCTG GGAAACGCAA
CTAGGCCCGG GTCGTCACCC GATTTCGTCG GCGTACTTCT GGTACTTCAA GAACCCTGCC
GGTGGCTTGA TCGAGTACTA CGCCGATGAA GACCAGCTTG ACGCCGACTG GCAGCCGCGC
GATTTCGAGC CCGGCCCGAC CGTGTTCGCC GAATGGGCCA TCGACGGCGG CATTGACGGC
AACACACGCC GGCAGAAAAA CGTCGCCGGC CCGGAAGGCA AGTTCCTCAC GGAAAAGCGC
TGA
 
Protein sequence
MNTIRGIDEI VYGADDLAAC KQFFLDWGLA LQSEDASGLL FETLNGCRVR VKRRDDATLP 
AAMEAGPTLC EVIWGTDSQA VLDRLVDKLA DQPGYVHADG RVGCTDPNGL AVRVQLTTKR
DVDVQCAAMN TWTDKPRRNQ PSPIYARATP IEVGHVVFFV KDVAATERFY IDKLGFVPSD
HYPGRGAFLR CEPEGGHHDL FLLQTPQAKS GLNHVAFTVR DIHEVFGGGM HVSRCGWETQ
LGPGRHPISS AYFWYFKNPA GGLIEYYADE DQLDADWQPR DFEPGPTVFA EWAIDGGIDG
NTRRQKNVAG PEGKFLTEKR