| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4468 |
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| Symbol | |
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| ID | 6285244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 784999 |
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| End bp | 787014 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642618947 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001892988 |
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| Protein GI | 187926643 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0659683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.254173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGC CGTGCGCGCT GCTCGACCCG AGCCGAATTG CGCAAATGTT TGCGGTGGCG
GTTACGTCGC TTTCCACAAC AGCGCTGGCC CAAACAGACG CGACAGACCT GACCGCGTTG
CCTATCGAAC AACTCATGCA GGTGCAGGTC GTCACCGGCG CATCCAAGTA CGCGCAAGCC
GCGAATGAGG CGCCCGCCAA CGTTTCGGTC ATTACCGCGG CGGACATCAA AGCCTATGGC
TGGCGCACGC TGGCCGACAT CCTGGGGAGC CTTCCAGGGC TCTACACCAA CTACGATCGC
AGCTACAACA CGCTTGGGGC GCGCGGCTTT CTGCGGGCGG GCGACTACGA CACCCGCTTC
CTGTTGCTGA TCGACGGCCA TCGCACCAAC GATCCGATCT TCGATCAGGC AGCCGTCGGG
ACCGAAGCCA TCCTCAACGT CGACCTGATC GAGCGGGTGG AGTACGTGCC CGGAGCGGGC
TCGGCGGTGT ACGGGTCGAA CGCGCTGTTC GGTGTGATCA ACATCATCAC CAAGCGCGGC
CGTGACATCG ACGGCGTGCA GGCCAGTGCA TCGACCGGCA GCGCCAATGC GCGCGATGCC
CGCCTGACGT GGGGCAAGCG AGCCGAGAAC GGTGCCGAGT GGCTGCTGTC GGCCAGCGTG
AGCGATGCCC CGGGCCGCGA CCTGTACTTT GCCGAGTTCA ATCAGCCCGG CGTGAGTGAC
GGTGTGGCCC GCGGCATGGA TTTCGACCGC GCCAAGCGTC TGTTTGCCAA GGGCAGTTTC
GGCGAGTTCG GGATGACCTT CGGCTACGTC GATCGGACGA AGGGCGTGCC CACTGCGCCG
TACAACCAGA GCTTCAACGA CCCGCGCTCG CGCGCTGTCG ATACGCGGCA GATATTCAAC
GGCACCTGGC AGCACGCACT GGACGACACG ACCGACGTGT CTGCGCGGCT ATTCTGGGGG
CGGTATGCGT CGCTGGGCGA TTACACGTAC AACCCGCCCC CGGCCGGCAT CAACCGCGAT
GTGTTCGATA CCGCGTGGTA CGGCACGGAA CTCAAGCTCG TGACGCGCCG TATCGAACGC
CATACGCTGG TCATGGGTAC CGAGCTGCAA CGGGATTACC GTGATGCAAT GCGTAATTTC
GATACGGTGC CCTACGTCAG TTACCTGGAC GACCATCGCA CCAACAACCG CGTGGGCGCA
TACGTGCAGG ACCAATTCAT GCTCCATCCG GATTGGGTGC TGGATACGGG CCTGCGCTAC
GACCATACGA GCTTCACGCC GGGCATCTTC AGCCCACGTG TGGGCCTGAT CTGGCATGCC
GCCCCAACGA CCACCGTCAA GGCGATCTAC GGCATGGCCT ATCGCGCGCC GAACGATTAC
GAATTGAACT ATCAGAGCAG TGCCCCCGGC GGCCAGCAGG CTACCCACGG GCTGTCGGCC
GAACGCATCC GTACGTATGA AGCGGTTGTC GAACAGCAAG TTGCCGCAGG CGGCAAAGCC
ACGTTGTCGG TGTTTCAGAA CAACGTTTCC AACCTGATCA GCCAGAGCGA AGACCCGAAC
ACCGGGCTGC TCTTCTTCAG CAACGTGGCG CGCGTGCGCA CACGGGGCGC AGAACTCGGC
TACGAGCAGA ACTGGCCGGG CGGCACGCGC CTGCGCACGA GCTACAGCTT CCAGCGTTCC
GAAGACATCG ACAGCGGCCA GACGCTGGCC AATTCGCCGC GTCACATGCT CAAGATCAAT
GCCACCGCGC CCGTGTGGCG TGACGACTGG CGCGCAGGGA TCGAGGCGCG ATACATCAGT
AACCGGCTGA CGACCACGGG CCAAGTGGGC GGTTACTGGA TCGCCAACCT GACCTTGCTG
GCGGCGCAGC TGGCACCCAA TCTGGAGATG TCGGCCAGCG TCTACAACCT GTTCGATCGA
CGCTACGCCG ATCCGGCCGG GCCGGAGCAA CCGCAGCCAT CCATCGAGCA GGATGGCCGT
ACTTTTCGCG TGAAATTTAC CTACACCTTC CGATGA
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| Protein sequence | MRLPCALLDP SRIAQMFAVA VTSLSTTALA QTDATDLTAL PIEQLMQVQV VTGASKYAQA
ANEAPANVSV ITAADIKAYG WRTLADILGS LPGLYTNYDR SYNTLGARGF LRAGDYDTRF
LLLIDGHRTN DPIFDQAAVG TEAILNVDLI ERVEYVPGAG SAVYGSNALF GVINIITKRG
RDIDGVQASA STGSANARDA RLTWGKRAEN GAEWLLSASV SDAPGRDLYF AEFNQPGVSD
GVARGMDFDR AKRLFAKGSF GEFGMTFGYV DRTKGVPTAP YNQSFNDPRS RAVDTRQIFN
GTWQHALDDT TDVSARLFWG RYASLGDYTY NPPPAGINRD VFDTAWYGTE LKLVTRRIER
HTLVMGTELQ RDYRDAMRNF DTVPYVSYLD DHRTNNRVGA YVQDQFMLHP DWVLDTGLRY
DHTSFTPGIF SPRVGLIWHA APTTTVKAIY GMAYRAPNDY ELNYQSSAPG GQQATHGLSA
ERIRTYEAVV EQQVAAGGKA TLSVFQNNVS NLISQSEDPN TGLLFFSNVA RVRTRGAELG
YEQNWPGGTR LRTSYSFQRS EDIDSGQTLA NSPRHMLKIN ATAPVWRDDW RAGIEARYIS
NRLTTTGQVG GYWIANLTLL AAQLAPNLEM SASVYNLFDR RYADPAGPEQ PQPSIEQDGR
TFRVKFTYTF R
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