Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4236 |
Symbol | |
ID | 6285696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 522416 |
End bp | 523843 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618719 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001892760 |
Protein GI | 187926415 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.829467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATGAGC CGTTCATCGC TCACCTGGTC AATACGCTGG CGCACGCGTT GTTGCCTGCG TTGCTGCCGT TTGTCGTGGC CTGCGGCGCG GGCAGTCTGC TGCTGCGTCT GCTTGATGAC TTGCGCAGTG CGACGGCCCC GCGCACGCGC GTGCCGCTGG TCATGACAGC GTTGTTCTCG GCGGTCGGGC TGTGGGCAGT GCCGCTGCTG CCGCTGCTTG CGCATTGGCC GCTGCACGAA GGTCCCGCGG TGCTTGTGAT GACGCTCGCG TCGTTCTGCT GGAGCCTGGC CGTGGCGGCG CTGTGGTGTG TGCTGGGCGG CCGTGCGGGC CTGATGCGCG CCCTGTTGCT CGGCGTGTTG CTGAGCGTAA GCGGCCCCGT GGCGGTGTTG CTGCTGGCGG GTGTGACCAG CTTCAGCGCC ACCGCCTGGG AAGACGCCGG GCTGCTCGGT ATCGTCATGG CTCTGTCGGC GATGGCGTGT GCTGCGGCGC TGCAATTTGC GCTCTCGGCG CGGTCGGGGG CGACCGGGGT AGCGGTACGC CGTCCGGGCG TGAGTCTGTT TGTCAGCGTG CTGTTTGGCG TTGCGTTGAC GGCGGATGCG GTGTACACGG CGTCGCTCGC AGGCTCGTTT TCGACGCTTT CCGACATGCC CGGCAATGCG CCGGCAGGGT TGCGGTTGCT GCTCGTGATG GGCGCGGCTG CAACAGCGCT CGCTGCTTTG CTGCTGGGCT ATCGGGATCG TGCAACAGGC GACACCGCCG CCGCCGTTGC CACACGCGAA ATCCGTCTGC GCAAGGAGAC CGTGCAGGCG CTCAACGACC TGGAGCAGAG CTACCGCCGC CGCGAGGCCG AACTTGTTGC CCGCCATCAA CTGCTGCTCG ACGGCGCAGA TGTCGGTCTG TGGGAGTTCG ATCTGGTCAC CCGCGCTGCG CAGTTCTCCG CGCGCTTTGC CGCCATGCTG GGCTACACGC TCAAGGAGAT CGGCCCAAGC ACGAGCGAGT ATCTCCGTCT GGTGTACCCG GATGATCTGC CCATGGTGCT CAATCGCATC CAGGCGCATG TTGACGGCAA TACGCCGGCT TACGTGGCGG AATTCCGCAT GCGGCACAAG GACGGCAGCT ATCGCCAGAT TGCCGCGCAC GGCGTGGCAG TGCGCGACGC CGGTGGCAAT GCCGTGCGCA TGGCAGGGTC GCATATCGAG GTGGCTGCAA AAGCAGCCTC GGCGGGGGTT GCCGGCTCAG CCGCTTCGAT CGTTGCCGAG GCACCGGAAA CGCTGCGTCG CCATGGCTTG TGGGAATCCT GGTCGCCTGC CGATCATCCC GCCGCAGAAG CTGTCGCACC GCAGACAGAA TCGACATCAC TGCCTGGGCC CACTACGACG TCCACAGGCG GCGCGCTTCC CAGCATCAAT CCCGACGCCT TGCGTTGA
|
Protein sequence | MDEPFIAHLV NTLAHALLPA LLPFVVACGA GSLLLRLLDD LRSATAPRTR VPLVMTALFS AVGLWAVPLL PLLAHWPLHE GPAVLVMTLA SFCWSLAVAA LWCVLGGRAG LMRALLLGVL LSVSGPVAVL LLAGVTSFSA TAWEDAGLLG IVMALSAMAC AAALQFALSA RSGATGVAVR RPGVSLFVSV LFGVALTADA VYTASLAGSF STLSDMPGNA PAGLRLLLVM GAAATALAAL LLGYRDRATG DTAAAVATRE IRLRKETVQA LNDLEQSYRR REAELVARHQ LLLDGADVGL WEFDLVTRAA QFSARFAAML GYTLKEIGPS TSEYLRLVYP DDLPMVLNRI QAHVDGNTPA YVAEFRMRHK DGSYRQIAAH GVAVRDAGGN AVRMAGSHIE VAAKAASAGV AGSAASIVAE APETLRRHGL WESWSPADHP AAEAVAPQTE STSLPGPTTT STGGALPSIN PDALR
|
| |