| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4182 |
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| Symbol | |
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| ID | 6285610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 455661 |
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| End bp | 458762 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618667 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001892708 |
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| Protein GI | 187926363 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.559486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CCGCCACCTT CATCGCGCGG CCGGTCGCCA CGGCGCTGCT GACCATTGGC
GTGGCGTTGG CCGGTATCGC GGCGTTCCGC CTGCTGCCGG TGTCCCCGCT GCCGCAGGTC
GATTTTCCGA CTATCTCGGT CAACGCTTCG CTGCCGGGCG CCAGCCCCGA GACCATGGCG
GCTACCGTCG CGACGCCGCT GGAGCGCTCG CTCGGCCGCA TCGCGGGCAT TACCGAGATG
ACCTCGTCCA GCTCGCTCGG CTCGTCGCGG ATCACGCTGC AGTTCGATCT GTCGCGCGAC
ATCGACGGCG CCGCGCGCGA CGTGCAGGCT GCCATCAATG CTTCGCGCAG CCTGCTGCCT
TCGGGCCTGC CGAGCAACCC GACGTATCGC AAGGTCAATC CGGCCGATGC GCCGATCATG
ATCGTGGGGC TGACGTCCGA CACCAAGTCG CGCGGCGAGT TGTACGATGC GGCCTCAACC
ATCCTTGCGC AGAAGCTGTC GCAGATCAAC GGCGTGGGCC AGGTCTCCAT CGGCGGAGCT
TCGCTGCCGG CAGTGCGGGT CGAGCTGAAC CCGATGGCGC TGAACAAGTA CGGCATCTCG
ATGGAGACCG TGCGCACCGT CATCACCAGC ACGAACGCGA ACAAGCCCAA GGGCATGATG
GAATCGGGCG ACCGCGTCTG GACCATCTAC GCCAACGACC AGGCAAAGAA GGCCGTCGAA
TACCAGTCGC TCATCATCGC CTGGCGCAAA GGGTCGCCGG TGCGGCTGGC CGACGTGGCA
GAAGTGACTG ACAGCGTGCA GGACATCCGC AACTACGGCT CGGCCAACGG CAAGCCCTCG
GTGCTGCTCA TCATCAGCCG GCAACCGGGC GCCAACATCA TCGACACGGT CGACCGCATC
AACGACGTGC TGCCGTACCT GCGCAACACC ATTCCCGCGC AGATCAACCT CGATGTGATG
ATGGACCGCA CGCCCACCAT CCGCGCCTCG CTCAAGGATG TAGAGCGCAC GCTGGTGCTG
TCGATCGCGC TGGTGATCAT GGTGGTGTTC CTGTTCCTGC GCAACGTGCG GGCGACGCTC
ATTCCGAGCG TGGCGGTGCC GGTCTCGCTG ATCGGCACAT TCGGGGTGAT GTACCTGTGC
GGCTACAGCC TCGACAACCT CTCGCTGATG GCGTTGACGG TGGCGACAGG CTTTGTCGTG
GACGACGCCA TCGTGGTGCT CGAGAACGTC TCGCGCCACA TCGAGAACGG CATGCGGCCC
ATGCAGGCGG CGCTCAAGGG TGCGCGCGAG GTCGGCTTCA CGGTGGTGTC GATGAGCTTT
TCGCTGATCG CCGTGTTCAT TCCGCTACTG ATGATGGGCG GCATCGTGGG CCGGCTGTTC
CGGGAGTTTG CGGTGACGCT GTCGGTGGCT ATCCTGGTAT CGCTGGTGGT ATCCCTCACC
ACCACGCCGA TGATGTGCGC GCGCTTGCTC AAGCCCGCCG CCGAGGAAGA ACACGGCTGG
TTTCACCGCA AGACCGAAGG CTTCTTCACC TTCCTGCTCG ACATCTACCG CAACTCGCTG
GCGTGGGCGC TGCGGCACAG CTGGCTTACC CTGCTCATCC TGTTGGCGAC GGTCTGCCTG
AACGTCTACC TGTACATCAT CGTGCCCAAG GGGTTCTTCC CGCAGCAGGA CACCGGCCGT
GTGATCGGTT TCATCCAGGC GGACCAGTCG ATCTCGTTCC AGGCGATGCG CACCAAGCTG
ACCGACTTCA TCACCATCGT TCGGCAAGAC CCTGCGGTGG AGAACGTGGT GGGCTTTACG
GGCGGCAGTC AGCGCAATAC CGGGCAGATG TTCATTCAGC TCAAGCCGCT GGCCGAGCGC
AGGATGTCCG CCGACCAAAT CATCAACCGG CTGCGCGGCA AGCTGGCGGG TGAACCCGGC
GCGAGCCTGT TCCTGCAATC GGTGCAGGAC ATCCGGGTCG GCGGTCGGGC CAGCAACGCG
CAGTACCAAT ACACACTGCA GGCCGACGAC CTGAACGAGC TGCGCGCGTG GGACCCGAAG
ATCAAGCAGG CGCTCACGCA GGTGAAATCG CTGACGGACG TCAACACTGA TACGCAGGAC
AAGGGCCTGC AGACGTCGCT CGTCATCGAC CGCGACAAGG CCAAATCGCT CGGCATCAAC
CCGAGCGATA TCGACAACGC CCTGAACAAC GCGTTCGGGC AGCGCCAGGT ATCGACCATC
TACAACCCGC TCAACCAATA CCGCGTTGTG ATGGAAGCGG CGCCGCAGTA CTGGCAGAAC
CCCGACGGTC TGCGTGACAT TTACATCATC ACCTCGACGG GTGCGCAGGT ACCGCTGTCG
ACCTTCTCGC ACTACGAGCC CACCAACACG GCGCTGGCGG TCAACCACCA GGGGCAGTTT
GCGGCAAGCA CGATCTCGTT CAACCTCGCG CCGGGGGCAT CGCTGTCCGG TGCAACGCAG
GACATCCAGG ACGCGATGAA CCGCATCGGC GTGCCGTCCT CCGTGCATGG AAGCTTCCAG
GGCACCGCGA AGGCGTTCCA GGATTCGCTC TCGAGTCAGC CGGTGCTGAT CCTGTTTGCG
CTCATCACCA TCTACATCGT GCTGGGCTTG CTGTATGAGA GCTACGTCCA CCCGATCACG
ATTCTCTCTA CGCTGCCCTC GGCCGGTGTG GGGGCGCTGC TGGCACTGAT CATTACCGAC
ACGGACTTTT CGATCATCGC GCTGATCGGC GTGATTCTGC TCATCGGCAT CGTCAAGAAG
AACGCCATCA TGATGATCGA CTTCGCGCTG GAGGCGGAGC GCAGCCAGGG CATGAGCCCG
GCGGATGCAA TCTTCCACGC CTGCGTGCTG CGCTTCCGGC CGATCTTGAT GACGACGATG
GCGGCGCTGC TGGGCGCCCT GCCCCTGGCG CTGGGCCACG GCGACGGCGC GGAGCTGCGT
ACGCCGCTGG GCATCTCCAT TGTCGGCGGG CTGCTGGTCA GCCAGATCCT TACGCTCTAC
ACCACGCCGG TGGTCTACCT GGCGCTCGAC CGGCTGCGCC TGCGCCGCGC CGGCCGCAGC
AAGGACGCAC CGCTGCCCGC ATTGGATTCG CAAGGAAGCT GA
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| Protein sequence | MNLSATFIAR PVATALLTIG VALAGIAAFR LLPVSPLPQV DFPTISVNAS LPGASPETMA
ATVATPLERS LGRIAGITEM TSSSSLGSSR ITLQFDLSRD IDGAARDVQA AINASRSLLP
SGLPSNPTYR KVNPADAPIM IVGLTSDTKS RGELYDAAST ILAQKLSQIN GVGQVSIGGA
SLPAVRVELN PMALNKYGIS METVRTVITS TNANKPKGMM ESGDRVWTIY ANDQAKKAVE
YQSLIIAWRK GSPVRLADVA EVTDSVQDIR NYGSANGKPS VLLIISRQPG ANIIDTVDRI
NDVLPYLRNT IPAQINLDVM MDRTPTIRAS LKDVERTLVL SIALVIMVVF LFLRNVRATL
IPSVAVPVSL IGTFGVMYLC GYSLDNLSLM ALTVATGFVV DDAIVVLENV SRHIENGMRP
MQAALKGARE VGFTVVSMSF SLIAVFIPLL MMGGIVGRLF REFAVTLSVA ILVSLVVSLT
TTPMMCARLL KPAAEEEHGW FHRKTEGFFT FLLDIYRNSL AWALRHSWLT LLILLATVCL
NVYLYIIVPK GFFPQQDTGR VIGFIQADQS ISFQAMRTKL TDFITIVRQD PAVENVVGFT
GGSQRNTGQM FIQLKPLAER RMSADQIINR LRGKLAGEPG ASLFLQSVQD IRVGGRASNA
QYQYTLQADD LNELRAWDPK IKQALTQVKS LTDVNTDTQD KGLQTSLVID RDKAKSLGIN
PSDIDNALNN AFGQRQVSTI YNPLNQYRVV MEAAPQYWQN PDGLRDIYII TSTGAQVPLS
TFSHYEPTNT ALAVNHQGQF AASTISFNLA PGASLSGATQ DIQDAMNRIG VPSSVHGSFQ
GTAKAFQDSL SSQPVLILFA LITIYIVLGL LYESYVHPIT ILSTLPSAGV GALLALIITD
TDFSIIALIG VILLIGIVKK NAIMMIDFAL EAERSQGMSP ADAIFHACVL RFRPILMTTM
AALLGALPLA LGHGDGAELR TPLGISIVGG LLVSQILTLY TTPVVYLALD RLRLRRAGRS
KDAPLPALDS QGS
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