| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4095 |
|---|
| Symbol | |
|---|
| ID | 6285469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 368303 |
|---|
| End bp | 369289 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642618584 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001892625 |
|---|
| Protein GI | 187926280 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA CGAGCGCTGC GTGCGCCAGA CGGACCGTAT TGACCTTCCT GGCTACGGCC
GGTGTGCTGC TGGCCACGGG CTTGGCGACA GCGGCGCACG CGGCTGACAA GTCGTTCACC
ATGGGTTTTG CCCAGGTGGG CGCCGAGAGC GAATGGCGGA CCGCCAATTC GGAGTCGATC
AAATCGACGG CCAAGGCGCA GGGCGTGAAC CTGAAGTTCT CCGACGCGCA GCAGAAGCAG
GAAAACCAGA TCAAGGCAAT CCGCTCGTAC ATCGCGCAGA AGGTCGACGT CATTGCGTTC
TCACCGGTGG TGGAATCCGG CTGGGACACG GTGCTGCAGG AGGCCAAGGC CGCCAAGATT
CCGGTCATCC TGACCGACCG CGGCATCGAC AGCAAAGACA CCTCGCTCTA CACCACGTTC
ATCGGATCGG ATTTCGTCGA GGAAGGCCGC AAGGCGGGCC GCTGGCTGCT TGAAAACGTC
AAGCCCAAGG GTGACGTGAA CATCGTCGAG CTGCAAGGCA CCGTCGGCTC TGCGCCCGCC
ATCGACCGCA AGCGCGGGTT TGAAGAGATC ATCAAGGCCG ACCCGCACTA CAAGATCATC
CGCTCGCAAA CCGGCGACTT CACCCGCGCC AAGGGCAAGG AAGTGATGGA AGCCTTCCTG
AAGGCCGAGG GTAAGAAGAT CAACGTGCTG TACGCGCACA ACGACGACAT GGCGATCGGT
GCCATCCAGG CCATTGAAGA GGCAGGGCTC AAGCCGGGCA AGGACATCAC CATCATCTCG
ATCGACGGCG TGAAGGGCGC GTTTGAAGCC ATGATGGCCG GCAAGCTGAA CGTCACGGTG
GAATGCAGCC CGCTGCTCGG GCCGCAACTG ATGGACACCG CGCGCGCCGT GCTGGCAGGC
AAGACCGTGC CCAAGCGCAT CGTCACCAAG GAAGGCATCT TCCCGATGGA GGTGGCGGCC
AAGGAGTTCC CGAACCGCAA GTACTGA
|
|---|
| Protein sequence | MQKTSAACAR RTVLTFLATA GVLLATGLAT AAHAADKSFT MGFAQVGAES EWRTANSESI
KSTAKAQGVN LKFSDAQQKQ ENQIKAIRSY IAQKVDVIAF SPVVESGWDT VLQEAKAAKI
PVILTDRGID SKDTSLYTTF IGSDFVEEGR KAGRWLLENV KPKGDVNIVE LQGTVGSAPA
IDRKRGFEEI IKADPHYKII RSQTGDFTRA KGKEVMEAFL KAEGKKINVL YAHNDDMAIG
AIQAIEEAGL KPGKDITIIS IDGVKGAFEA MMAGKLNVTV ECSPLLGPQL MDTARAVLAG
KTVPKRIVTK EGIFPMEVAA KEFPNRKY
|
|---|
| |