| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3924 |
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| Symbol | |
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| ID | 6285104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 168910 |
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| End bp | 169602 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642618417 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001892458 |
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| Protein GI | 187926113 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.654005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGC TGGTGTCAGC GGCTGCCATC GCGGGCGGGC TAGCCATTGG CCTGCTCTTG
ACGGCGCTGC GCGCGAGTGC TCAGCCGTGG CTGCACTTGC CGGCCCGCGC GCTGGTGGCC
TTTCTGCGCA AGACGCCGTT GCTGGTGCAA TTGTTCTTCT GGTATTTCGG CGCGGCGCAA
TTGCTTGGCG AAGACGTGGT CGGGGCCATC ATCGGCTGGG GCGGCATCGC CGTGGGTGCC
TGGCGGTTGC CTGCGCCGTC GTTCGAATTT CTGGCGGCCG CGTTCGGCAT CGCGCTGTAT
GCCGGTGCGT TCTTCTCGGA AGAGCTGCGC GCTGGCATTC GGGCCGTGCC GCGCGGGCAG
CGAGAGGCCG CGCTATCGCT GGGTTTCACG CCGCGTGCCG CCTTCCTGCG TGTGGTGCTG
CCGCAGGCGC TGCGCGTGTC GGCGCTGCCG TTGCTGGGGC AATGTGCCAA CACCATCAAG
AACACCTCGC TCGCCATGGG TATCGGGCTG GCAGAGCTTG CGTATAGCGC CCGGCAGGTG
GAAACCGACA CGCTGCTCGC CTTCCAGGCC TTTGCCGTGG CAACCGTGCT GTATGCCGGA
GTGATTCTGT TGCTGCAATG GGTGGCGCCC CGCGTGCTGC GGCGGCTTGG CTGGACATCG
ACATCGACGC TACCGGACGG AGCCCCCGCG TGA
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| Protein sequence | MTLLVSAAAI AGGLAIGLLL TALRASAQPW LHLPARALVA FLRKTPLLVQ LFFWYFGAAQ
LLGEDVVGAI IGWGGIAVGA WRLPAPSFEF LAAAFGIALY AGAFFSEELR AGIRAVPRGQ
REAALSLGFT PRAAFLRVVL PQALRVSALP LLGQCANTIK NTSLAMGIGL AELAYSARQV
ETDTLLAFQA FAVATVLYAG VILLLQWVAP RVLRRLGWTS TSTLPDGAPA
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