| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3907 |
|---|
| Symbol | |
|---|
| ID | 6285049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 153042 |
|---|
| End bp | 153851 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618400 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001892441 |
|---|
| Protein GI | 187926096 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000804884 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.943348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCT TCGACGATGA TCTGACGCGG TTTGCCGCCC ACGGTGCAGA ACCGCTGCCC
CCCGCCGTTG AGCAAGGCCA TGTCGAGCAC GACGGCGCCC GCATCTGGTA TGCGACCTTC
GGTGCCGGCA CACCTGTGAT CTTGCTGCAT GGCGGGCTCG GCCATGGCGG CAATTGGGGA
TATCAGGTTC CGGCACTCAT GACTGCTGGC TACCGGCCTA TCGTCATTGA TAGCCGTGGG
CACGGTCGCA GCACGCGCGA TGCGCAGCCT TACGCCTACA CGCGCATGGC TTCCGACGTG
CGGGCCGTGA TGGATGCGCT GCGCATCGAC CGCGCCGCCT TCATCGGCTG GAGCGACGGT
GCTTGCGTTG CGCTCACCCT CGCCATGCAG ACACCGGAGC GCGCTATTGG CGTGTTCTTC
TTCGGTTGCA ACATGGATCC AAGCGGCGCC AAACCCTTCG CGCCGACGCC CGTCATCGAC
CGCTGCTTCG GTCGCCACCT AAAGGATTAC ACCGCGCTGT CATCCACACC GGACGACTTC
GATGCCTTTG TCGAGGCCGT CACCGAAATG ATGCAGACGC AGCCGAATGC AACAGCCGAG
GAACTGGCGG CGACCCGTGT GCCGGTCACC ATCGCGCAGA GCGAACACGA CGAGTTCATC
TGGCCCGAGC ACGCGCACTA TCTGGCACGG ACCCTTCCTG AAGCACAGTT TGTGTTGCTG
CCGGGCGTGA GCCATTTCGC GCCGTTGCAG CGACCGGCGG TGTTCAACGA CGCCGTGCGC
GCGTTCCTTC ACGGAATTTG TCAGACGTAG
|
|---|
| Protein sequence | MDTFDDDLTR FAAHGAEPLP PAVEQGHVEH DGARIWYATF GAGTPVILLH GGLGHGGNWG
YQVPALMTAG YRPIVIDSRG HGRSTRDAQP YAYTRMASDV RAVMDALRID RAAFIGWSDG
ACVALTLAMQ TPERAIGVFF FGCNMDPSGA KPFAPTPVID RCFGRHLKDY TALSSTPDDF
DAFVEAVTEM MQTQPNATAE ELAATRVPVT IAQSEHDEFI WPEHAHYLAR TLPEAQFVLL
PGVSHFAPLQ RPAVFNDAVR AFLHGICQT
|
|---|
| |