| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3522 |
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| Symbol | gidB |
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| ID | 6286795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3692620 |
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| End bp | 3693288 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642627107 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001901074 |
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| Protein GI | 187930587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0003474 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCGAATG CACTGACAGA CGCCCGGGCA GAGTTGGAAG CCGGCGCCCG TGCGCTTGGC
TTGTCGCTGG ACGACGCGCA GGTCGATCGC CTGCTGGCGT ATCAAGGGCT GCTGGCCAAA
TGGAACCGCG TCTATAACCT GACCGCCATT CGTGATGCCG GCGACATGCT GACGCATCAC
CTGCTGGATT CGCTCTCGGC CGTGTCGCGC ATCGCCGGTT TGGCCCGCCG TGCCCAACCC
GACGCACCGC GCGTGCTGGA CGTCGGTTCG GGTGGTGGGC TGCCGGGCAT TCCGCTGGCC
ATCGCTTTCC CAGATGTAAG CGTCACGATG GTCGACATCG TGCAGAAGAA GACCGCCTTC
CTGACGCAGT GCCGCGCCGA GCTTGGCTTG GCCAATGCCC AATCGCATTG GGGCCATGTA
GAAAAACTGG CCGATGCCAC CGGCTACGGC GTCATCACGT CACGCGCGTT TGCCGAGTTG
GTCGATTTCG TGAATCTGGC CGGGCACCTG CTGGCGCCCG GCGGCCGCAT GGTCGCCATG
AAGGGCGTGC GCCCGGATGC CGAAATCGAA CGCCTGCCCG CCGGCTGGAC CGTCGAAGCC
ATCGAGCGCC TGACCGTGCC GGGGCTGCCG GCTGAGCGTC ACCTGGTCAT CCTCGCGCCG
TCGGCGTGA
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| Protein sequence | MANALTDARA ELEAGARALG LSLDDAQVDR LLAYQGLLAK WNRVYNLTAI RDAGDMLTHH
LLDSLSAVSR IAGLARRAQP DAPRVLDVGS GGGLPGIPLA IAFPDVSVTM VDIVQKKTAF
LTQCRAELGL ANAQSHWGHV EKLADATGYG VITSRAFAEL VDFVNLAGHL LAPGGRMVAM
KGVRPDAEIE RLPAGWTVEA IERLTVPGLP AERHLVILAP SA
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