Gene Rpic_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3473 
Symbol 
ID6287460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3629838 
End bp3631178 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content63% 
IMG OID642627058 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_001901025 
Protein GI187930538 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCT TTACGCGCCC GTTGTTCGGG CAGGTTTTGA TTGCCCTGGC GGTGGGCATC 
GCGCTGGGCA TCTGGGCGCC CGAATTTGCG CAGAAGCTGC AGCCGCTCGG TGATGGTTTT
CTGAAGCTGA TCAAGATGCT GATCGCGCCG ATCGTCTTCT CCGTCGTGGT GGTGGGGATC
TGCGGCGCCG GCGAGCTGAA GAAGGTCGGG CGCGTGGGCG GCAAGGCCGT CATCTACTTC
GAGATCGTCA CGACGATCGC GCTGGCGCTG GGCATTGCGC TGGCCTATCT GTTCGGGCCG
GGCCACGGCA TGAATGTGGA TCCTAAGACG CTCGATCCGG CGGCCATGGC GTCATACATG
ACCACCGCCA AGCAGGTGGA ATCGACCGGC GTTGCAGCGT TCTTCCTCAA GCTGATTCCC
GATACGTTCG TCAGCGGCTT TGTGAAGGGC GACATCCTGC AGGTGCTGCT GGTGTCGATC
CTGTTCGGCT GCTCCCTCTC GCTGCTAGGA GAGCGGACCA AGCCGCTGGT CAACCTGATC
GATCAGCTCT CGCATGTGCT GTTCCGCATG ATGGCCGTGA TCATCCGCCT GGCGCCGCTG
GGCGTGCTGG GCGCGGTGGC CTTTACCGTC GGCAAGTACG GCGCAGGTTC GCTCAAGCAA
CTGGGCTTCC TGGTGCTGCT GTTCTATGCA GCCGTGGCGA TCTTCGTGGT GGTGGTGCTC
GGCACGATCC TGCGCCTGGC GGGCTTCAAC ATCTTCAAGC TGATCCGCTT CCTACGCGCG
GAACTGCTGG TGGTGCTGGG CACGGCGTCG TCCGACGCAG TGCTGCCGTC CATCATGAAC
AAGCTGGAAA AGATGGGCAT CAAACGCTCG GTGGTCGGCC TTGTCATCCC GACGGGCTAC
TCGTTCAACC TCGATGCGTT TTCGATCTAT CTGACGCTGG CCGCCGTGTT CATTGCACAG
GCGACCAATA CGCCGCTGGC GCTGCAGGAT CTGCTGCTGA TCCTGGGCGT GGCGCTCGTC
ACCTCCAAGG GCGCGCACGG CATTCCGGGT TCGGCCATCG TGATTCTGGC GGCCACGCTG
TCGGTCATTC CGGCCATTCC GGCGATCGGC CTGGTGCTGG TGCTCTCCGT CGACTGGTTC
ATCGGCATTG CCCGTGCGCT GGGCAACCTG ATCGGCAACT GCGTCGCAAC GGTCGTCATC
GCGGCGTGGG AGAAAGACAT CGACCGCGTA CGCGCCAATG CGGTGCTCGA CGGCAAGATC
GACATCACCG AAGAAGGCGA AGCGATTCCG CACGGCCTTG GCGTTGCGGC ACCTGCAGCC
CATACGCTGC CGCATGCCTG A
 
Protein sequence
MQRFTRPLFG QVLIALAVGI ALGIWAPEFA QKLQPLGDGF LKLIKMLIAP IVFSVVVVGI 
CGAGELKKVG RVGGKAVIYF EIVTTIALAL GIALAYLFGP GHGMNVDPKT LDPAAMASYM
TTAKQVESTG VAAFFLKLIP DTFVSGFVKG DILQVLLVSI LFGCSLSLLG ERTKPLVNLI
DQLSHVLFRM MAVIIRLAPL GVLGAVAFTV GKYGAGSLKQ LGFLVLLFYA AVAIFVVVVL
GTILRLAGFN IFKLIRFLRA ELLVVLGTAS SDAVLPSIMN KLEKMGIKRS VVGLVIPTGY
SFNLDAFSIY LTLAAVFIAQ ATNTPLALQD LLLILGVALV TSKGAHGIPG SAIVILAATL
SVIPAIPAIG LVLVLSVDWF IGIARALGNL IGNCVATVVI AAWEKDIDRV RANAVLDGKI
DITEEGEAIP HGLGVAAPAA HTLPHA