Gene Rpic_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3411 
Symbol 
ID6286749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3575928 
End bp3576512 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content63% 
IMG OID642626996 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001900964 
Protein GI187930477 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.608689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CAGAACCAAC CTTCCATTCG GTCGTTGCCA TCGACGACCA CCCGATCGTC 
CTCGAATCCA TTCAAGCCTT GCTTGCCGGA TCGCCGCATC TCCAGCTTGT CGCCACAGCG
GCCGATGGCG CGCAGGGGCT GCAGTTGATC CGCTCCGCGC GCCCTAAGCT CGCCATCGTT
GATATCAATC TGCCAAATCT GGACGGGCTG GAACTCGTGC GTCGCGTGCG CGCGCAGCGC
CGCGATATTG GCCTAGTCGT CACGTCTGCC CAGACCACCG GCAACGAGGC ACGGCTCGCT
TTCCTGGCGG GCGCCAACGC CTACGTGCCG AAATCGGAAG CGACCTCTGT GCTGACGGCG
GCACTGTTGC TGGCGGCACG CGGCTATCTC TCGTTTCCCG CCTCTGCGAT GGGGCCATCG
GAAGGCGCTG GGCTTGCCAC GCTTACCCAG CGCGAAATGC GTGTGAACCA ACTGCTGGCC
GAAGGCCATC GGAACACAGA GATCGCCAAG CGCCTCGGCA TCTCGCCCAA GACGGTGTCC
ACGTTCAAGC ATCGCATCTT GAGGAAGGTC GGACTTCCCG CCTGA
 
Protein sequence
MSATEPTFHS VVAIDDHPIV LESIQALLAG SPHLQLVATA ADGAQGLQLI RSARPKLAIV 
DINLPNLDGL ELVRRVRAQR RDIGLVVTSA QTTGNEARLA FLAGANAYVP KSEATSVLTA
ALLLAARGYL SFPASAMGPS EGAGLATLTQ REMRVNQLLA EGHRNTEIAK RLGISPKTVS
TFKHRILRKV GLPA