Gene Rpic_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3375 
Symbol 
ID6287928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3537121 
End bp3538125 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID642626960 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_001900928 
Protein GI187930441 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.148839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCGA TTGCTTATGA CCGTGCATCT TCCGTCGAGG CTGCCGTGCG CCTGGGCAAC 
GAGCCGGGCG CGCGCTATAT CGGCGGCGGG ACGAATCTGC TGGACCTGAT GAAGGGCGGG
ATCGAGCAGC CGCAGCGCCT CGTGGACGTG AGCCGCCTGC CGCTGGCGCA GATTCGCGCG
TTGCCCGACG GCGGCCTGCG ACTGGGCGCG ATGGCGCGCA ATGCCGACAC GGCGGCGCAT
CCGCTGGTGC GCTCGCGCTA TCCGCTCCTG AGCGAGGCGA TTGTCTCGGG TGCGTCGGGG
CAGCTGCGCA ACATGGCCAC CAACGGCGGC AACCTGATGC AGCGCACGCG CTGCCATTAC
TTCTACGACA CGGCGTACCC GGCGTGCAAC AAGCGGCAGC CCGGCTCCGG CTGTGCCGCG
CGCGAGGGTT TCAATCGCAT GCATGCCATT CTGGGTGCGA GCGAGGCATG CGTGGCGACG
CATCCGTCCG ACATGGCCGT CGCCTTGGCC GCGCTCGACG CCACGGTGGT GGTGCACGGC
GCGCGCGGTG AGCGGCGTAT CCCGATCGAC GCGTTCCATC GGCTGCCGGA AGCGCACCCC
GAAATCGACA CGACACTCGG GCCCGGCGAG CTGATCGTCG CCATCGATCT GCCGCCGCCC
GTGTTCGGCT CGCACGTGCA TTACCTGAAG GTGCGCGACC GTGCCAGTTA TGCGTTTGCG
CTGGTGTCGG TGGCTGCGGC GCTGGCGTTG CAAGCGGATG GGCGGACGAT CCGGGAGGCG
CGCATCGTGC TGGGCGGCGT CGCGCACAAG CCGTGGCGTG CGCATGCGGC GGAGCAGATG
CTGGCGGGGC AGGTGCTGGA CGCGCACTTG TTTGCCCAGG CCGGCGCGTT GGCCGTGCAG
GGCGCACAGC CACTGCGCGA CAACGGCTTC AAGGTGCCGC TCGCACAGCG TGCGGTGGCG
CGCGCGCTAA CCGTGGCTTC CGACCCGACT GGAGGCGTGG CATGA
 
Protein sequence
MQSIAYDRAS SVEAAVRLGN EPGARYIGGG TNLLDLMKGG IEQPQRLVDV SRLPLAQIRA 
LPDGGLRLGA MARNADTAAH PLVRSRYPLL SEAIVSGASG QLRNMATNGG NLMQRTRCHY
FYDTAYPACN KRQPGSGCAA REGFNRMHAI LGASEACVAT HPSDMAVALA ALDATVVVHG
ARGERRIPID AFHRLPEAHP EIDTTLGPGE LIVAIDLPPP VFGSHVHYLK VRDRASYAFA
LVSVAAALAL QADGRTIREA RIVLGGVAHK PWRAHAAEQM LAGQVLDAHL FAQAGALAVQ
GAQPLRDNGF KVPLAQRAVA RALTVASDPT GGVA