| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3343 |
|---|
| Symbol | |
|---|
| ID | 6288535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3499802 |
|---|
| End bp | 3500722 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642626927 |
|---|
| Product | alpha/beta hydrolase-like protein |
|---|
| Protein accession | YP_001900896 |
|---|
| Protein GI | 187930409 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4757] Predicted alpha/beta hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCG AACCGATCGA CTACCCCGCC GATGCCCTTC CCACCCGCGA TGACCACGTC
CGCACAGCCG ATGGCTGGAC GTTGCCCGTG ACGGTCACCA GCCCTGGGCT GGGCGCGCAC
GGCACGGTGG TGATCTGCTC GGCGTTGGGC GTGCCGCGCC GGTTCTACGC GGCGTTTGCG
CGGGCCCTGT GCCTGGCGGG CTGGCGTGTG GTGACGTTCG ACTATCGCGG CATTGGTGAG
GCGGCCGCGA CCGGCCCGGG CACGCCGCGC TTTGCCGATT GGGGCCGGCA CGACATCGAC
GCCGTGCTGA AATGGGTGCA CGACACGCTC GTCCCCGAGG GCTGCAGCGG CCGCAGGCTG
GTGGTGCTCG GCCACAGCGC GGGCGGGCAA TTGGCGGGGC TGGCGCCGCA TATCGTGCAC
GCCGATGCGC TGGTGCACGT GGCGGTGTCG CTGGCGAATG CGCGGCTCTG GCCGTGGCGC
GGGCTGTTGA CGCGTCCGCA GCTCGCGTGG CTGCTGCATG TGCGGATTCC GTTGGCGGTG
GCGCGCGTGC GCGGCGGCAT GCTGCCGCTG GCGGCCGTCG GCATGGGGCC GATGTCGATT
CCGGCTGCCA TCCTCGGCGA TTGGGCGCGC TTTGCCCGTC GGCGTGGCTA TTTCTTTGCG
CCTGGCGCGG GGCTGGATAC GTCGCGTTAC CCGAGGCTCG CCGTGCCGCT GCTCGCCTGG
GGTTTCGACG ATGATCCGAT GGCGCCCGCC AACGCCATCG ACGCGCTCAT CGCGAAGTTG
CCCGCCACGC GCGTCACGCG CCGCCAGGTG AGCGGCGCGG CGCTGGGCGC CAAGGGCGTC
GGCCACATGG GCTTCTTCCG CGCATCGTCC GGTGCGCCGT GGTGGCGCGA AACCGTGGCG
TGGCTCGATG CCCTCGCTTG A
|
|---|
| Protein sequence | MQREPIDYPA DALPTRDDHV RTADGWTLPV TVTSPGLGAH GTVVICSALG VPRRFYAAFA
RALCLAGWRV VTFDYRGIGE AAATGPGTPR FADWGRHDID AVLKWVHDTL VPEGCSGRRL
VVLGHSAGGQ LAGLAPHIVH ADALVHVAVS LANARLWPWR GLLTRPQLAW LLHVRIPLAV
ARVRGGMLPL AAVGMGPMSI PAAILGDWAR FARRRGYFFA PGAGLDTSRY PRLAVPLLAW
GFDDDPMAPA NAIDALIAKL PATRVTRRQV SGAALGAKGV GHMGFFRASS GAPWWRETVA
WLDALA
|
|---|
| |