| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3305 |
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| Symbol | |
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| ID | 6288446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3442811 |
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| End bp | 3444724 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626881 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001900859 |
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| Protein GI | 187930372 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.563115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0132339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGACT CTCCCGCCAT AGACCACGCG CTGCAGGCGC TGCCCGAAGA CACCGCCGCC
GCGACGCATG CGGTGCTGCA CGATGTGTTC GGCTACAGCG CCTTCCGCGG CCCGCAGGCG
GAAATCGTCG CGCACGTCGC CGACGGCGGC GATTGTCTCG TGCTGATGCC GACCGGCGGT
GGCAAATCGC TCTGTTACCA GATACCGGCG CTCGTGCGGC ACCGGCGCGG GCAGGGCGCC
GGCATTGTGG TTTCGCCGCT GATCGCGTTG ATGCAGGACC AGGTGGCCGC GCTGGAAGAA
GCCGGCGTGC GCGCCGCGTA CCTCAACTCC GCGCTGACGG GCGCCGAGGC CGCCCAGGTC
GAGCGAGATT TGGCGGCGGG CCGGCTGGAT CTCGTCTACG TGGCGCCCGA GCGGTTGATG
ACGCCGCGCT TCCTCGAGTT GCTTGAGCGA TCGCGCATCG GCCTGTTCGC CATCGACGAA
GCGCACTGCG TGTCGCAATG GGGGCACGAT TTCCGGCCCG AGTACATCCA GCTTTCCGTG
CTGCACGAGC GTTTTCCGCA CGTGCCGCGC ATCGCGCTCA CCGCCACGGC CGATGCGGTC
ACGCGGGACG AGATCATCGA ACGGCTCGCG CTCACGGGTT CCCGCGTCTT CCTCTCCAGC
TTCGACCGCC CGAACATCCG CTACACCATC GTCGAGAAGG ACAGCGCGCG GCAGCAGCTG
CTGCGCTTCA TTCGCGCCGA GCACATGGAC GGCGACACCT GCGACGCCGG CATCGTCTAC
TGCCTGTCGC GCAAGAAGGT GGAAGAGACC GCGCAGTGGC TGGCCGAGCA GGGCATCCGC
GCGCTGCCGT ATCACGCCGG GATGGACTCC GACGTGCGCG CACGCCATCA GGCCATCTTC
CGCAAGGAGG AAGGCGTCGT GATGGTGGCG ACCATCGCTT TCGGCATGGG GATCGACAAG
CCGGACGTCC GCTTCGTTGC CCACCTGGAT CTGCCCAAGA GCCTGGAGGG CTACTATCAG
GAGACTGGCC GTGCGGGCCG TGACGGCATG CCCGCCAACG CCTGGATGGC TTACGGTCTG
GCCGACGTGG TGCAGCAGCG CCGGATGATC GACGAGTCCG ATGCGGACGA TGTGCATAAG
CGCGTCTCAA CCGCCAAGCT CGAAGCGCTG CTCGGCCTGT GCGAAGCCGC AACCTGCCGC
CGTGTGGCGC TGCTCGCGTA CTTCGGGGAA AGCAGCCAGC CCTGCGGCAA CTGCGATACG
TGCCTCACGC CGCCGCAAAC CTGGGATGCC ACACGCGAGG CACAGATGGC GCTGTCCTGC
GCATACCGCG TCCAGCAAGC CAGCCGCGTG AGTTTTGGCG CGGGCCAGCT CATCGACATC
CTGCGCGGCA ACGCAACCGA GCGCATCAAG CAGTGGCACC ACGAAACGCT GTCCACCTTC
GGCATCGGCA GCGATCTGTC CGAAGCCGCT TGGCGCAGCG TATTCCGTCA GTTGGTTGCG
CAGGGCTTGT TTGCGGTGGA CCACGGCGGC CACGGTGCGC TGATCCTGAC CGATGCCGCG
CGCCCCGTGC TCAAGGGCGC GCAATCGGTG ATCCTGCGCC GTCAGGCCGA GAAGGTGCGC
GGCGCGTCGT CATCGTCGAC GAAGAAGGAG CGTCGCGCCG ATCCGGCCGC CGAGCTTTCC
ACCGAGGCGC AGGTGCGCTG GCAGGCGTTG CGGGCCTGGC GGACGCAGGC CGCGCGCGAG
CACAGCGTGC CGGCGTATGT GATCTTCCAC GACGCGACGC TTGCGCGCAT TGCCGAGACC
GATCCGGATT CGCGCGAGGC GCTCGGCGAG CTGCCGGGTA TCGGCATGGC CAAGTTGGAC
CGCTACGGCC AGGCGCTGCT CGACGTACTG GAGAAGTGCC GCGAGCAAGC CTAG
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| Protein sequence | MYDSPAIDHA LQALPEDTAA ATHAVLHDVF GYSAFRGPQA EIVAHVADGG DCLVLMPTGG
GKSLCYQIPA LVRHRRGQGA GIVVSPLIAL MQDQVAALEE AGVRAAYLNS ALTGAEAAQV
ERDLAAGRLD LVYVAPERLM TPRFLELLER SRIGLFAIDE AHCVSQWGHD FRPEYIQLSV
LHERFPHVPR IALTATADAV TRDEIIERLA LTGSRVFLSS FDRPNIRYTI VEKDSARQQL
LRFIRAEHMD GDTCDAGIVY CLSRKKVEET AQWLAEQGIR ALPYHAGMDS DVRARHQAIF
RKEEGVVMVA TIAFGMGIDK PDVRFVAHLD LPKSLEGYYQ ETGRAGRDGM PANAWMAYGL
ADVVQQRRMI DESDADDVHK RVSTAKLEAL LGLCEAATCR RVALLAYFGE SSQPCGNCDT
CLTPPQTWDA TREAQMALSC AYRVQQASRV SFGAGQLIDI LRGNATERIK QWHHETLSTF
GIGSDLSEAA WRSVFRQLVA QGLFAVDHGG HGALILTDAA RPVLKGAQSV ILRRQAEKVR
GASSSSTKKE RRADPAAELS TEAQVRWQAL RAWRTQAARE HSVPAYVIFH DATLARIAET
DPDSREALGE LPGIGMAKLD RYGQALLDVL EKCREQA
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