Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3233 |
Symbol | |
ID | 6287273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3379034 |
End bp | 3379822 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642626809 |
Product | ABC-2 type transporter |
Protein accession | YP_001900787 |
Protein GI | 187930300 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA TTCCCGAGAG CATGCCGGGC CGTTGGGTCG GTTTCCGTAC GCTGCTGTAC AAGGAAGTGC TGCGCTTCTG GAAGGTGAGC TTCCAGACCG TGGCCGCGCC GGTGCTGACC GCGCTGCTTT ATCTGCTGAT TTTCGGCCAC GTGCTGGAGG ACCGCGTCAA GGTGTTCGAC CAGTTGAGCT ACACCGCCTT TCTGGTGCCT GGTCTGGTAA TGATGAGCGT GCTGCAGAAC GCCTTCGCAA ACAGCTCGTC GTCGCTCATC CAGTCGAAGA TCACCGGCAA CCTGGTGTTC ATCATGCTGC CGCCGCTGTC GCATTGGGAG ATGTTCGGTG CCTACGTGTG TGCGTCCGTC ATTCGCGGTC TCGCTGTGGG TACGGGCGTG CTTGTCGTGA CGACCTTGTT TGCGCACCTG CACTTCGCGC AGCCGCTCTG GATCATCGTG TTTGCCGTGC TGGGCGCGAG CGTGCTCGGC ACGCTGGGGT TGATTGCTGG CATATGGGCT GAAAAATTCG ACCAGCTTGC GGCGTTCCAG AACTTTCTGA TCGTGCCGGC CACCTTCCTG GCGGGCGTGT TCTATTCGAT TCATTCACTG CCGCCGTTCT GGCAGGCGGT GTCCCACGCC AACCCGTTCT TCTACATGAT CGACGGCTTC CGCTACGGCT TCTTCGGCGT GTCCGATGTG CCGGTGGCGA CGAGCCTCGG CGTGATGCTG ATCGCGCTGG TCGTAGTGGG GGGAGTGGCC CTGCAGATGC TGCGCACGGG CTACAAGCTG CGCCATTGA
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Protein sequence | MNAIPESMPG RWVGFRTLLY KEVLRFWKVS FQTVAAPVLT ALLYLLIFGH VLEDRVKVFD QLSYTAFLVP GLVMMSVLQN AFANSSSSLI QSKITGNLVF IMLPPLSHWE MFGAYVCASV IRGLAVGTGV LVVTTLFAHL HFAQPLWIIV FAVLGASVLG TLGLIAGIWA EKFDQLAAFQ NFLIVPATFL AGVFYSIHSL PPFWQAVSHA NPFFYMIDGF RYGFFGVSDV PVATSLGVML IALVVVGGVA LQMLRTGYKL RH
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