Gene Rpic_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3233 
Symbol 
ID6287273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3379034 
End bp3379822 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID642626809 
ProductABC-2 type transporter 
Protein accessionYP_001900787 
Protein GI187930300 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA TTCCCGAGAG CATGCCGGGC CGTTGGGTCG GTTTCCGTAC GCTGCTGTAC 
AAGGAAGTGC TGCGCTTCTG GAAGGTGAGC TTCCAGACCG TGGCCGCGCC GGTGCTGACC
GCGCTGCTTT ATCTGCTGAT TTTCGGCCAC GTGCTGGAGG ACCGCGTCAA GGTGTTCGAC
CAGTTGAGCT ACACCGCCTT TCTGGTGCCT GGTCTGGTAA TGATGAGCGT GCTGCAGAAC
GCCTTCGCAA ACAGCTCGTC GTCGCTCATC CAGTCGAAGA TCACCGGCAA CCTGGTGTTC
ATCATGCTGC CGCCGCTGTC GCATTGGGAG ATGTTCGGTG CCTACGTGTG TGCGTCCGTC
ATTCGCGGTC TCGCTGTGGG TACGGGCGTG CTTGTCGTGA CGACCTTGTT TGCGCACCTG
CACTTCGCGC AGCCGCTCTG GATCATCGTG TTTGCCGTGC TGGGCGCGAG CGTGCTCGGC
ACGCTGGGGT TGATTGCTGG CATATGGGCT GAAAAATTCG ACCAGCTTGC GGCGTTCCAG
AACTTTCTGA TCGTGCCGGC CACCTTCCTG GCGGGCGTGT TCTATTCGAT TCATTCACTG
CCGCCGTTCT GGCAGGCGGT GTCCCACGCC AACCCGTTCT TCTACATGAT CGACGGCTTC
CGCTACGGCT TCTTCGGCGT GTCCGATGTG CCGGTGGCGA CGAGCCTCGG CGTGATGCTG
ATCGCGCTGG TCGTAGTGGG GGGAGTGGCC CTGCAGATGC TGCGCACGGG CTACAAGCTG
CGCCATTGA
 
Protein sequence
MNAIPESMPG RWVGFRTLLY KEVLRFWKVS FQTVAAPVLT ALLYLLIFGH VLEDRVKVFD 
QLSYTAFLVP GLVMMSVLQN AFANSSSSLI QSKITGNLVF IMLPPLSHWE MFGAYVCASV
IRGLAVGTGV LVVTTLFAHL HFAQPLWIIV FAVLGASVLG TLGLIAGIWA EKFDQLAAFQ
NFLIVPATFL AGVFYSIHSL PPFWQAVSHA NPFFYMIDGF RYGFFGVSDV PVATSLGVML
IALVVVGGVA LQMLRTGYKL RH