Gene Rpic_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3202 
Symbol 
ID6286162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3351254 
End bp3351751 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID642626778 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001900756 
Protein GI187930269 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.631262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.769041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAA CTTCCACCAA GCCCTATCTG ATCCGTGCAA TCTACGAATG GTGCACGGAC 
AACGGCTTCA CGCCGTACAT CGCTGTCTTC GTCGACAACA GTACCAACGT GCCGCGCGAG
TTCGTCAAGA ACGACGAGAT CGTGCTGAAC GTGAGCTTTG ACGCGACCAG CCAGCTCGAC
ATGGGCAACG AGTGGATCAC GTTCCACGCA CGCTTCTCGG GCGTGTCTCG CAAGATCGAG
GTGCCGATCG AAAACGTGCT TGCTGTGTAT GCGCGCGAGA ACGGGCAGGG TATGGCATTC
CCGGTGGAAC GCAGCACGCC GACGGTGCAG GCCGCGACCG AACGCGAGAA CAATCCGCCG
CCCAAGCTGG CCGCAGTGGA CTCCGAATCC ATGCCTGCGC CGGTCCCTGC CGAAGCCGAA
ACTGGCCCGG AAGACGACCC GACACCGCCG AATGTGCCGC GCATCGGTGG CAAGCCTGCG
CTAAAGGTCG TCAAGTAA
 
Protein sequence
MSETSTKPYL IRAIYEWCTD NGFTPYIAVF VDNSTNVPRE FVKNDEIVLN VSFDATSQLD 
MGNEWITFHA RFSGVSRKIE VPIENVLAVY ARENGQGMAF PVERSTPTVQ AATERENNPP
PKLAAVDSES MPAPVPAEAE TGPEDDPTPP NVPRIGGKPA LKVVK