| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3155 |
|---|
| Symbol | |
|---|
| ID | 6288893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3305187 |
|---|
| End bp | 3307745 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626730 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | YP_001900709 |
|---|
| Protein GI | 187930222 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0101464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAG CCCAGACTGG CGGTGCTCCC GGCGCCGCCC CCTCCACCAG CCCTGCCACA
GCGCAGTCTG TGGCAGACCA TTACCTTGAA GCGCTGCCGC TGGCGGCCGA TGCGCGTGCT
GCGCTGCTGC ACGACGCGGG CATCACCGCT GGCGACGACG ATGCAGCGGC GCTTGCCAAG
CTGCATCGCG CACTGGCCAG GCTCGACCCG GCGCAGACAA CCTCGCTTGA CGCCGACGCG
CCGGCCTACG CCTCCGTAGG CTCGCGCCTG GATGCCGCCT ATGGCGCCAC GCGCGCCAAT
GCCGCATCGA CGGAGCCCAC TGCTGAACCG GTACCGCCGC TTGAGCACGA TAGCCAGGGC
CGCATCCATC TGGATACGGG CCCCGCACCC GCGCGCCGGT CGATGGTGCC GTGGCCGTGG
GTGCTCGGGC CCATCTGGCG CGCGCGCAAG GCCATCGACC GCTGGATGCA CGGCGGCCAG
AAGCCGGTGC CGTATGAAGC GCCCGACTCG CCCGACCCGA AAGGCATCTG GCGCTTCGTC
GGGGCGCGCC GGCGCCTGAC GCTTCTCGCG CTGATGATCG CGCAGACCAT CGCTGCCACC
TGGGCGATGA GCACAGTGCT GCCATACCAC GGCGCAGATT GGCTCGAAGC CATCATCATC
GTGCTGTTTG CGGTGCTGTT CTGCTGGGTG TCAGCTGGCT TCTGGACGGC CATCACCGGC
TTCCTGCTGC TGGCCTTCCA CGGCGACCGC TTCGTCATCT CGCGCCGCGC CACGCCCGAC
GCCACGATTC CGGACGATGC GCGCACGGCC ATCGTCATGC CGATCTGCAA TGAAGATGTG
CAGCGCGTGT TCGCGGGGCT GCGCGCGACG TACGAGTCGT TGCAGCGCAC GGGACACCTG
GAGCACTTCG ACTTCTTCGT GCTGTCGGAC TCCGGCGACC CGGACATCCG CACGGCAGAA
GCCGACGCAT GGCTGCACAT CTGCCGCGCG CTCGATGGTT TCGGCCGCAT CTTCTACCGC
TGGCGCCGCC ACCGCGTGAA GCGCAAGAGC GGCAACATCG ACGATTTCTG CCGGCGCTGG
GGCGGCAAAT ACCGCTACAT GATCGTGCTC GACGCCGACA GCGTGATGAG CGGCGATTGC
CTGACGCGCC TCGTGCAGTT GATGGAAGGC GCGCCAAGCG CGGGCATCAT CCAGACCGCG
CCGCGCGCCG CCGGCCGCGA CACGCTGTAT GCGCGTATCC AGCAATTCGC CACGCGCGTG
TACGGGCCGC TGTTCACCGC TGGCCTGCAC TACTGGCAAC TCGGCGAGTC GCACTACTGG
GGCCACAACG CCATCATCCG GCTAGACCCG TTCATCAAGC ACTGCGCGCT GGCGCCGATT
CCGGGCAAGG GCTCGCTTTC CGGCGAGATC ATGTCGCACG ACTTTGTCGA AGCCGCGCTG
ATGCGGCGCG CCGGCTGGGC CGTGTGGATC GCCTACGACC TCGACGGCAG CTACGAAGAA
ATGCCGCCCA ACCTGCTCGA CGAGCTGGGC CGCGACCGCC GCTGGTGCCA CGGCAACCTC
ATGAACTTCC GCCTGTTCGG CGCGCCGGGC TTTCACCGTG TGCACCGCGC GGTGTTCATC
ACCGGCGTGA TGGCGTATCT GTCGGCGCCG CTGTGGTTCC TGTTTCTGAT CCTGTCGACG
GCCCTGCTGG CCAAGCACAC GCTGATCGCG CCGGAATACT TCACGCAGCC CCGCCAGCTC
TTCCCGATCT GGCCGGAGTG GCATCCGGAA AAAGCCGCCG CGCTGTTTTC CGCCACCGCC
ACCGTGCTGT TCCTGCCGAA GATCCTGAGC GTGCTCGTCC TGTGGGCGCA GGGGCCGAAA
CGCTTTGGCG GGGCGATCCA CCTGGCGTTG TCGATGGCAA TCGAGGCGGT GTTCTCGGTG
CTGGCCGCGC CGGTGCGCAT GCTGTTCCAC ACGCGCTTTG TGACGGCCGC GTTCCTCGGC
TGGAAGGTGC ACTGGAAGTC GCCGCCGCGC GAAGATGCAC AGACGCATTG GAGCGACGCC
GTACGCCGCC ACGGCCTGCA CACCGTCATC GGCATCGTTT GGGCCGCCAT CGTGTATTGG
CTGAACCCGA GCTTCCTTTG GTGGCTGTCG CCCGTGGTCG GCGCGCTGAT CGTGTCGATT
CCGCTGTCCG TGTTCTCCAG CCGCGTGAGC CTGGGCCGCC GCATGCGGCG CCTGCGCCTG
TTCATGATTC CCGAGGAAGT GCGCCCGCCG CGTGAGTTGC GCGCCACGCG CAAGCACCTG
CGCAATGCGC CGCCGATGCC GGATTTCCGC CAAGCCGTGG TCGACCCCGT CACCAACGCG
CTGATGTGCG CGATCGGCAC GGCGCGCTTT CCGCACGACC GGCGCTTGGT TGCCGTGCGT
GAGGCGCATG TGCGCCATGC GTTGGAGGTT GGCCCGGACA AGCTCACGGG CAAGCAGAAG
CTGGTGTTGC TGTCCGATCC ATTCTCCTTG TCGGCACTGC ACCTGGCGGT GTGGTCGTCA
CCTGCACAGC GTGCGGCCTG GGAAGCTGCA CAGGGCTGA
|
|---|
| Protein sequence | MTTAQTGGAP GAAPSTSPAT AQSVADHYLE ALPLAADARA ALLHDAGITA GDDDAAALAK
LHRALARLDP AQTTSLDADA PAYASVGSRL DAAYGATRAN AASTEPTAEP VPPLEHDSQG
RIHLDTGPAP ARRSMVPWPW VLGPIWRARK AIDRWMHGGQ KPVPYEAPDS PDPKGIWRFV
GARRRLTLLA LMIAQTIAAT WAMSTVLPYH GADWLEAIII VLFAVLFCWV SAGFWTAITG
FLLLAFHGDR FVISRRATPD ATIPDDARTA IVMPICNEDV QRVFAGLRAT YESLQRTGHL
EHFDFFVLSD SGDPDIRTAE ADAWLHICRA LDGFGRIFYR WRRHRVKRKS GNIDDFCRRW
GGKYRYMIVL DADSVMSGDC LTRLVQLMEG APSAGIIQTA PRAAGRDTLY ARIQQFATRV
YGPLFTAGLH YWQLGESHYW GHNAIIRLDP FIKHCALAPI PGKGSLSGEI MSHDFVEAAL
MRRAGWAVWI AYDLDGSYEE MPPNLLDELG RDRRWCHGNL MNFRLFGAPG FHRVHRAVFI
TGVMAYLSAP LWFLFLILST ALLAKHTLIA PEYFTQPRQL FPIWPEWHPE KAAALFSATA
TVLFLPKILS VLVLWAQGPK RFGGAIHLAL SMAIEAVFSV LAAPVRMLFH TRFVTAAFLG
WKVHWKSPPR EDAQTHWSDA VRRHGLHTVI GIVWAAIVYW LNPSFLWWLS PVVGALIVSI
PLSVFSSRVS LGRRMRRLRL FMIPEEVRPP RELRATRKHL RNAPPMPDFR QAVVDPVTNA
LMCAIGTARF PHDRRLVAVR EAHVRHALEV GPDKLTGKQK LVLLSDPFSL SALHLAVWSS
PAQRAAWEAA QG
|
|---|
| |