Gene Rpic_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3069 
Symbol 
ID6286823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3203047 
End bp3204321 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID642626640 
Productprotein of unknown function DUF21 
Protein accessionYP_001900624 
Protein GI187930137 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.319515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTCTT GGCCGCTCTG GGCACAAATT GGCGCCGTCG TGCTGCTGTT GTGCTGCTCC 
GCCTTCTTCT CGATTTCCGA AACCGCGATG ATGGCGCTCA ACCGCCATCG CCTGCGGCAT
CTTGCCAAGT CCAACGTATC GGGCGCGCGC AATACGCAGC AGTTGCTCGG TCAGACCGAC
AAGCTGCTCT CGCTCATCCT GATCGGCAAC AACCTGATCA ACACCGCCGT GCCGGTGCTG
ATCACCACCC TGGCGATCCA CTACTTTGGC AACAACGGAA CGACGCTGTC GATCGCCACG
GCCATCGTGG CGTTTCTCAT CATCGTGTTC GCCGAGATCG CCCCGAAGAT CGTGGGCGCG
ACCTATCCCG AACGCGTTGC GTTTCCCGCC AGCTTCATCA TCAAGCCGCT GCTGCAGATT
TCGACGCCGC TGGTGGCGGT AGTCAACGCG TTTGCCATGG GTGTGCTCAG ATTGGTGCGC
ATCAACACGC GCAAGGCGCC GGAGCAGCGC ATGTCGACCG AGGAACTGCG TACGCTGGTG
CTGGAATCGG GCAACTTCAT CCCGCACAAG CACCGCAGCA TCCTGCTCAA CCTGTTCGAT
CTGGACGCCA TCACCGTGGA CGACGTGATG ACGCCGCGCG CGCGGGTGGA ATCGCTCGAC
CTGTCGCGCC CGATCGAAGA GGTCGTCCAG CAACTCGAGA CCTGCTATCA CAACAAGCTT
CCGGTGTTCG AGCAGGACAG CGATCAGGTG ATCGGCATCC TGCATGTGCG CAAGGCGCTG
TCACTTCTGG GGCACACCGA ACTCACGCAC GACGATTTCC GTAGCCTGCT GGCCGAGCCC
TATTTCGTAC CGAGCGGCAC ACCCGTTTTC CGCCAGCTAC AGTATTTTCA GGAGAACCGC
CGCCGCCTCG GGCTGATCGT CAATGAGTAC GGCGACATGC TTGGGCTGGT GACGCTCGAA
GACATCATCG AAGAGATGAT CGGCGAGTTC ACCACCACGC TGCCCAACGC CGGCAAGCTG
GCGTGGGACA AGGAAGGCAC TTATCTTGCG GATGCGGGAA TGTCGTTGCG CGATCTGAAC
CGGCGCCTGG GCCTGAGTCT GCCGACCGAC GGCCCGAAAA CGCTCAACGG GCTGCTACTG
GAAGAGCTGG AAGAGATTCC CGAGGCGACG GTCAGCGTGA AGATCGCGGG CTGCGTGATG
GACATCGTCC AGATGGACAG TCAGTCGATC CGCACGGTGC GACTGCATCA GCCGCCGCAG
CCAAAGCGTA GTTGA
 
Protein sequence
MDSWPLWAQI GAVVLLLCCS AFFSISETAM MALNRHRLRH LAKSNVSGAR NTQQLLGQTD 
KLLSLILIGN NLINTAVPVL ITTLAIHYFG NNGTTLSIAT AIVAFLIIVF AEIAPKIVGA
TYPERVAFPA SFIIKPLLQI STPLVAVVNA FAMGVLRLVR INTRKAPEQR MSTEELRTLV
LESGNFIPHK HRSILLNLFD LDAITVDDVM TPRARVESLD LSRPIEEVVQ QLETCYHNKL
PVFEQDSDQV IGILHVRKAL SLLGHTELTH DDFRSLLAEP YFVPSGTPVF RQLQYFQENR
RRLGLIVNEY GDMLGLVTLE DIIEEMIGEF TTTLPNAGKL AWDKEGTYLA DAGMSLRDLN
RRLGLSLPTD GPKTLNGLLL EELEEIPEAT VSVKIAGCVM DIVQMDSQSI RTVRLHQPPQ
PKRS