Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3069 |
Symbol | |
ID | 6286823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3203047 |
End bp | 3204321 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642626640 |
Product | protein of unknown function DUF21 |
Protein accession | YP_001900624 |
Protein GI | 187930137 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.319515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACTCTT GGCCGCTCTG GGCACAAATT GGCGCCGTCG TGCTGCTGTT GTGCTGCTCC GCCTTCTTCT CGATTTCCGA AACCGCGATG ATGGCGCTCA ACCGCCATCG CCTGCGGCAT CTTGCCAAGT CCAACGTATC GGGCGCGCGC AATACGCAGC AGTTGCTCGG TCAGACCGAC AAGCTGCTCT CGCTCATCCT GATCGGCAAC AACCTGATCA ACACCGCCGT GCCGGTGCTG ATCACCACCC TGGCGATCCA CTACTTTGGC AACAACGGAA CGACGCTGTC GATCGCCACG GCCATCGTGG CGTTTCTCAT CATCGTGTTC GCCGAGATCG CCCCGAAGAT CGTGGGCGCG ACCTATCCCG AACGCGTTGC GTTTCCCGCC AGCTTCATCA TCAAGCCGCT GCTGCAGATT TCGACGCCGC TGGTGGCGGT AGTCAACGCG TTTGCCATGG GTGTGCTCAG ATTGGTGCGC ATCAACACGC GCAAGGCGCC GGAGCAGCGC ATGTCGACCG AGGAACTGCG TACGCTGGTG CTGGAATCGG GCAACTTCAT CCCGCACAAG CACCGCAGCA TCCTGCTCAA CCTGTTCGAT CTGGACGCCA TCACCGTGGA CGACGTGATG ACGCCGCGCG CGCGGGTGGA ATCGCTCGAC CTGTCGCGCC CGATCGAAGA GGTCGTCCAG CAACTCGAGA CCTGCTATCA CAACAAGCTT CCGGTGTTCG AGCAGGACAG CGATCAGGTG ATCGGCATCC TGCATGTGCG CAAGGCGCTG TCACTTCTGG GGCACACCGA ACTCACGCAC GACGATTTCC GTAGCCTGCT GGCCGAGCCC TATTTCGTAC CGAGCGGCAC ACCCGTTTTC CGCCAGCTAC AGTATTTTCA GGAGAACCGC CGCCGCCTCG GGCTGATCGT CAATGAGTAC GGCGACATGC TTGGGCTGGT GACGCTCGAA GACATCATCG AAGAGATGAT CGGCGAGTTC ACCACCACGC TGCCCAACGC CGGCAAGCTG GCGTGGGACA AGGAAGGCAC TTATCTTGCG GATGCGGGAA TGTCGTTGCG CGATCTGAAC CGGCGCCTGG GCCTGAGTCT GCCGACCGAC GGCCCGAAAA CGCTCAACGG GCTGCTACTG GAAGAGCTGG AAGAGATTCC CGAGGCGACG GTCAGCGTGA AGATCGCGGG CTGCGTGATG GACATCGTCC AGATGGACAG TCAGTCGATC CGCACGGTGC GACTGCATCA GCCGCCGCAG CCAAAGCGTA GTTGA
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Protein sequence | MDSWPLWAQI GAVVLLLCCS AFFSISETAM MALNRHRLRH LAKSNVSGAR NTQQLLGQTD KLLSLILIGN NLINTAVPVL ITTLAIHYFG NNGTTLSIAT AIVAFLIIVF AEIAPKIVGA TYPERVAFPA SFIIKPLLQI STPLVAVVNA FAMGVLRLVR INTRKAPEQR MSTEELRTLV LESGNFIPHK HRSILLNLFD LDAITVDDVM TPRARVESLD LSRPIEEVVQ QLETCYHNKL PVFEQDSDQV IGILHVRKAL SLLGHTELTH DDFRSLLAEP YFVPSGTPVF RQLQYFQENR RRLGLIVNEY GDMLGLVTLE DIIEEMIGEF TTTLPNAGKL AWDKEGTYLA DAGMSLRDLN RRLGLSLPTD GPKTLNGLLL EELEEIPEAT VSVKIAGCVM DIVQMDSQSI RTVRLHQPPQ PKRS
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