| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3058 |
|---|
| Symbol | |
|---|
| ID | 6286174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3192747 |
|---|
| End bp | 3193340 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626628 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_001900613 |
|---|
| Protein GI | 187930126 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.429511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACA CGTTTCTCTC GGCGACCGTT CTGCTGGTGC TGATCACCGA TCCGCTCGGC
AACATTCCGA TCTTCATCTC GGCGCTGCGG CCGGTCGCTC CCGAGCGCCG CAACCGCGTC
GTGCTGCGCG AGGTCGGCAT TGCGTTCGTG CTGCTGCTCG TCTTCATGTT CTTCGGCGAG
AGCTTCCTGC GCATGATGAG CCTGACCGAC ATGTCGCTGC AGATTGCAGG CGGCATCGTG
CTGTTCCTGA TCGCGCTGCG GATGATCTTC CCGCGTGAAG GTGCTGCCGA GTCGCAGCCC
ACAGGCGAGC CCTTCATCGT GCCGCTGGCG ATTCCGGCCA TCGCGGGGCC GTCGGCGATG
GCCACGGTGA TGCTGCTGGT GTCACAGGCG CCCGGGCGCA TGTGGACGTG GGTCGGCTCG
CTATGCGCGA CGATGGCCGT GTGCGCGGTG GTGCTGCTGA GCGCCACGCA TATCCAGCGC
CTGGTAGGGG AGCGTACGGT GATGGCGTTC GAGCGGCTGA TGGGGCTGAT CCTGGTGGCG
ATCTCGGTGG AGATGCTGCT CAAGGGCATC CGCACATTCG CGCATCAACT CTGA
|
|---|
| Protein sequence | MEYTFLSATV LLVLITDPLG NIPIFISALR PVAPERRNRV VLREVGIAFV LLLVFMFFGE
SFLRMMSLTD MSLQIAGGIV LFLIALRMIF PREGAAESQP TGEPFIVPLA IPAIAGPSAM
ATVMLLVSQA PGRMWTWVGS LCATMAVCAV VLLSATHIQR LVGERTVMAF ERLMGLILVA
ISVEMLLKGI RTFAHQL
|
|---|
| |