Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3013 |
Symbol | |
ID | 6287901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3141120 |
End bp | 3143465 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642626583 |
Product | malic enzyme |
Protein accession | YP_001900568 |
Protein GI | 187930081 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG TGGATACCCA GCCTCAGCAG CCCGCCCGCA CGGATGAAGA ACTCAAGGCG CAGCAGCGCG CCGCCTTGCG CAAGGCCGCG CTGGAGTACC ACGAGTTTCC GACCCCGGGC AAGATTTCCG TCACGCCGAC CAAGCCGCTG TCGAACCAGC GCGACCTCGC CCTGGCGTAT TCACCGGGTG TTGCCGCCGC CTGTGAAGAG ATCGTCGAAG ACGTTACCAA CTCGTTCCGC TACACCGCCC GCGGCAACCT CGTCGGCGTG GTGACCAACG GTACGGCCGT GCTCGGCCTG GGCGATATCG GCCCGGAAGC CTCGAAGCCG GTCATGGAAG GCAAGGCGGG CCTGTTCAAG AAATTCGCTG GTATCGATGT GTTTGATATC GAGATCAACG AAAAAGACCC CCAAAAGCTT GTCGATATCA TCGCCTCGCT GGAGCCGACC TTCGGCGGCA TCAACCTCGA AGATATCAAG GCACCGGAGT GCTTCTTCGT CGAGCGCGAA CTGCGCAAGC GCATGAAGAT CCCCGTCTTC CATGATGACC AGCACGGCAC CGCCATCGTC GTGGGCGCAG GCATCACCAA TGCGCTCAAG GTGGTCGGCA AGGACATCAA GAAGGTCAAG CTGGTGGCGT CGGGCGCGGG CGCTGCGGCG CTGGCCTGCC TGGACTTGCT GGTCGACCTC GGCCTGCCGC GCGAAAACAT CTGGGTGACG GACTTGGCCG GTGTGGTCTA CGAAGGCCGT ACCGAACTGA TGGATCCGGA CAAGGCGCAC TTCGCACAGA AGACCGATCT GCGTACGTTG GCCGAAGTCA TCGATGGCGC TGACATTTTC CTGGGCCTGT CCGCCGCCGG CGTGCTTAAG CAGGACATGG TCAAGAAGAT GGCCGACAAG CCGATCATCT TCGCGCTGGC CAATCCGAAC CCGGAAATCC TGCCGGAACT GGCCAAGGAA GTGCGCCCGG ACGTCATCAT GGGCACCGGC CGCACGGATT ACCCGAACCA GGTCAACAAC GTCCTGTGCT TCCCGTTCAT CTTCCGCGGC GCGCTGGATG TGGGCGCGAC CACCATCACG CGTGAGATGG AAGTTGCCGC CGTGCACGCC GTGGCTGAAC TGGCTCGCCA GGAGCAAAGC GACATCGTCG CTTCCGCCTA CGGCATCCAG GACTTGTCGT TCGGCCCCGA ATACCTGATC CCGAAGCCCT TCGACCCGCG CCTGATTGTC AAGATCGCGC CGGCCGTGGC GCAGGCGGCC ATGCTCTCGG GCGTGGCGCA GCGTCCGATC GAAGACATGG ACGCCTACCG CCAGCACCTG CAGCAATTCG TCTACCACTC GGGCACGCTG ATGAAGCCGA TCTTCTCGGC CGCCCGCAAG GTGCCGATGG AGAACAAGCG CATCATCTTT GCCGAAGGCG AAGAAGAGCG CGTGCTGCGT GCCGTGCAGA TCGTTGTGGA TGAAAAGCTC GCCAGCCCGA TCCTGATCGG CCGCCCGAGC GTGATTGCCC ACCGCATCGA ACGCTTCGGC CTGCGTCTGC GTGAAGGCGT GGATTTCACC GTGGTGAACC CCGAGCACGA CGAGCGCTTC CGCGACTACT GGGAAACGTA CTACAAGCTG ATGGCGCGCA AGGGCGTGAC GCCGCAGTAC GCGAAGCTGG AAGTGCGCCG CCGTTCGACG CTGATCGGCG CCGTCATGAT CCACAAGGGC GAAGCCGACG GCATGATTTG CGGCACGGTC AGCACCACCG CTGCGCACCT GCGCTACATC GACCAGGTCA TCGGTGGCAC GAACTGCGTG TACGCCGCCA TGAACGGTCT GGTCCTGCCT GGCCGTCAGA TCTTCTTGAC AGATACGCAC GTCAATATCG ACCCCACTGC CGAGCAACTG GCCGAGATCA CCATCATGGC CGCCGAGGAA CTGTGCCGCT TCGGCATCAA GCCAAAGGTT GCGCTGATGT CGCACTCGAA CTTCGGTTCG TCGGAGGCGC CTTCTGCCGT CAAGATGCGC GAAACGCTGG CTATCCTGCG CGAACGCGCC CCGAACCTGG AAGTGGACGG TGAGATGCAT GGCGACGCCG CGCTCGACGA GAAGCTGCGG GACTCGCTGG TGCCGGATTC GACGCTCAAG GGCGAAGCCA ACCTGTTGGT CATGCCGAAT ATCGATGCCG CCAACATCGC CTATAACCTG CTGAAGGCGG CCGCCGGCAA CAACATCGCC ATCGGCCCGA TCCTGCTGGG CGCAAAAAAG CCGGTGCACA TCCTCACGCC GTCGGCAACG GTGCGACGTA TCCTCAACAT GACGGCCCTG ACCGTTGTGG ATGCCGCTGC ACAAGCGCAA CGCTGA
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Protein sequence | MTTVDTQPQQ PARTDEELKA QQRAALRKAA LEYHEFPTPG KISVTPTKPL SNQRDLALAY SPGVAAACEE IVEDVTNSFR YTARGNLVGV VTNGTAVLGL GDIGPEASKP VMEGKAGLFK KFAGIDVFDI EINEKDPQKL VDIIASLEPT FGGINLEDIK APECFFVERE LRKRMKIPVF HDDQHGTAIV VGAGITNALK VVGKDIKKVK LVASGAGAAA LACLDLLVDL GLPRENIWVT DLAGVVYEGR TELMDPDKAH FAQKTDLRTL AEVIDGADIF LGLSAAGVLK QDMVKKMADK PIIFALANPN PEILPELAKE VRPDVIMGTG RTDYPNQVNN VLCFPFIFRG ALDVGATTIT REMEVAAVHA VAELARQEQS DIVASAYGIQ DLSFGPEYLI PKPFDPRLIV KIAPAVAQAA MLSGVAQRPI EDMDAYRQHL QQFVYHSGTL MKPIFSAARK VPMENKRIIF AEGEEERVLR AVQIVVDEKL ASPILIGRPS VIAHRIERFG LRLREGVDFT VVNPEHDERF RDYWETYYKL MARKGVTPQY AKLEVRRRST LIGAVMIHKG EADGMICGTV STTAAHLRYI DQVIGGTNCV YAAMNGLVLP GRQIFLTDTH VNIDPTAEQL AEITIMAAEE LCRFGIKPKV ALMSHSNFGS SEAPSAVKMR ETLAILRERA PNLEVDGEMH GDAALDEKLR DSLVPDSTLK GEANLLVMPN IDAANIAYNL LKAAAGNNIA IGPILLGAKK PVHILTPSAT VRRILNMTAL TVVDAAAQAQ R
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