Gene Rpic_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2982 
Symbol 
ID6289705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3107396 
End bp3107920 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID642626552 
ProductRare lipoprotein B 
Protein accessionYP_001900537 
Protein GI187930050 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGT CCCGAGGTTT GTCCCGCCGT CGCTTTGGCC GCTCTGTCCT TGCGCTTGCG 
ATTGCGCTGC CGGCGCTGTC CGCTTGCGGT TTCCACATGC GGGGCAACAC CGACTTCGCG
TTCAAGCGGC TGTACATCAA CTTGCCGCAG AACTCGCAGA TGCGCGCGCA GTTGCGCCGG
CTGATCGACA ACGGCTCCGA CACCATCATC GTGTCGGATA AGAAAGACGC CGATGCGCTG
CTCGACGTGC TGGCCGAAGA CCGCGTGAAG ACCATCTCGT CGCTCACGCC GCAGGGTGTG
GTGCGCGAGT ACCGCATCAC GTACCGCTTC CGCTTCCAGC TGCGCGATGC GCACGACAAC
CTGCTGATCC CGCCGTCGGA AATCACGCAG TTCCGCGATC TCTCGTACAA CGAGACACAG
GTGCTCGCCA AGGACTACGA AGAAGCGGCG CTCTACCGGG ACATGCAGGG CGATACGATC
AACCAGCTCG TACGGCGCCT GGGCGCCGTG AAACTGCCGT CGTAA
 
Protein sequence
MSLSRGLSRR RFGRSVLALA IALPALSACG FHMRGNTDFA FKRLYINLPQ NSQMRAQLRR 
LIDNGSDTII VSDKKDADAL LDVLAEDRVK TISSLTPQGV VREYRITYRF RFQLRDAHDN
LLIPPSEITQ FRDLSYNETQ VLAKDYEEAA LYRDMQGDTI NQLVRRLGAV KLPS