Gene Rpic_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2909 
Symbol 
ID6288268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3022687 
End bp3023385 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID642626479 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_001900464 
Protein GI187929977 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCA TGACCCGCCG CGCCGACCGC CTGTTCCAGA TTGCCCAGAT CCTGCGAGGC 
CGCCGTTTGA CCACGGCGGC CATGCTGGCC GACCGCCTGG GCGTGTCGGA GCGCACGGTG
TATCGCGATA TCCGCGATCT ATCCGTCTCA GGCGTACCGA TCGAAGGGGA GGCCGGTATC
GGCTACCGCA TGCGGGCAGG CTACGACCTT GCGCCGCTCA TGTTCACCGC CGACGAAGTC
GAAGCGCTCG TGGCCGGCGC ACGGATGATC AAGGCGTGGA GTGGTGGCAC CATGGCCGAC
TCGGTGGAAG CCGCACTGGA AAAGCTGATG GGCGCCCTGC CCGCCGAGCG CCGCTCCGAA
GCCGAGACCA CACGCATCTT CGCGCCCGGC TACGGCATGG GCAGCGAGGT CAAGCAAGTA
TTCGACACGT TGCATGCAGC GCTTGGCCGC CACGCTGTTG CGCGGCTTGC TTACCGCGAC
GCGCAGGGCC AGTTGACCGA GCGCTGCATC CAACCGCTCG GCCTGTTCTT CTGGGGACAA
GTCTGGCTGG TGGCCGCCTG GTGCGAACAC CGTCAGGACT ACCGCACCTT CCGCCTCGAC
CGCTGCGTCA AGGTCGACAT TCTGGAGCGC CACTTTGCCG AATCCGCCGA GCGCTCGCTG
GCGGATTTCA TGCGCAAGGT GCGAGGCTCG TCGGATTGA
 
Protein sequence
MPRMTRRADR LFQIAQILRG RRLTTAAMLA DRLGVSERTV YRDIRDLSVS GVPIEGEAGI 
GYRMRAGYDL APLMFTADEV EALVAGARMI KAWSGGTMAD SVEAALEKLM GALPAERRSE
AETTRIFAPG YGMGSEVKQV FDTLHAALGR HAVARLAYRD AQGQLTERCI QPLGLFFWGQ
VWLVAAWCEH RQDYRTFRLD RCVKVDILER HFAESAERSL ADFMRKVRGS SD