Gene Rpic_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2769 
Symbol 
ID6289664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2881166 
End bp2882056 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID642626340 
Productdihydrodipicolinate synthase 
Protein accessionYP_001900325 
Protein GI187929838 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCAG GAATCTGGAT TCCGCTGGTC ACGCCGTTCC ACCATGGACA GGTCGACACC 
GCCGCACTGC GGCAACTGGT ACGCCATTAC GAGGGCGCCG GTGTGTCGGG CTTCGTGGCG
CTGGGCACGA CCGGTGAAGC CGCGCTGCTC TCTCAGATCG AGCGCTACAC CGTTTTGGAG
GCCATCGCGG ACGCTTGCGG CGAGCGCACG CCGTTTCTGA TCGGCGTCGG CGCGACGGAC
ACACGCGACG TGTGCGCGCA GATCCGCCAC TACGAGCGTT GGAACAGCGC CGGCTACCTC
GTGCCCCCGC CGTATTACGT CTGCCCTTCG CAAGCGGGAT TGCACTGGCA CTACGCACAC
GTGGCGGCCA GCACGGCCCG CCCCGTGGTG CTCTACAACG TGCCCAAGCG CACAGGCGTC
TCGATCGCGC CCGATACCGC GCTGGCGCTG GCTGAACAGC CCAACATCAT CGCCATCAAG
GAATGTGTGG CCGAGCATTT CGGCGCGTTG CAGGATGGGC CGCTGGATGT GCTGAGCGGC
GATGACAGCG CGCTGCTCGA TTGCCTCGCA CATGGCGGCA CGGGAGGCAT CCTGGCCGGC
GCGCATCTGC GGCCGGAGTT GTTCGTGGCG CTCGTCGCGC ACCATCGTGC GGGCCGCATC
GACGAGGCGC GCCGCCTGGC CGACGCGTTG GCGCCGCTGG CTGCGCTGCT GTTTGCAGAG
CCGAACCCCG CGCCGGTCAA GGCGGTGTTG TCAGCGGAGG GCCGCATTGG CGCAGACACG
CGCGCGCCGA TTCTGCCGGT ATCCGAATCG CTGCACCGCC GCCTGGTGGC AGCGATGCAC
GCGTTGGAAA ACGTCAAAGC GGATTGCCCG CCGCAGCTGG CCGCGATGTA G
 
Protein sequence
MFSGIWIPLV TPFHHGQVDT AALRQLVRHY EGAGVSGFVA LGTTGEAALL SQIERYTVLE 
AIADACGERT PFLIGVGATD TRDVCAQIRH YERWNSAGYL VPPPYYVCPS QAGLHWHYAH
VAASTARPVV LYNVPKRTGV SIAPDTALAL AEQPNIIAIK ECVAEHFGAL QDGPLDVLSG
DDSALLDCLA HGGTGGILAG AHLRPELFVA LVAHHRAGRI DEARRLADAL APLAALLFAE
PNPAPVKAVL SAEGRIGADT RAPILPVSES LHRRLVAAMH ALENVKADCP PQLAAM