Gene Rpic_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2718 
Symbol 
ID6289102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2831283 
End bp2832473 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content61% 
IMG OID642626290 
Productfatty acid desaturase 
Protein accessionYP_001900275 
Protein GI187929788 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGACT CCTTTCTGAC TTTCCTTGCC AACGGCACCC TGGATTGGGC CTGGTGGCAG 
ATCCTGATTT TCACGCTGGT GATGACGCAC ATCACGATCG CCAGCGTCAC GATTTTTCTG
CACCGCTGCC AGGCGCACCG TGCGCTGGAC GTGCATCCCA TCGCCGGACA CTTCTTCCGT
TTCTGGCTGT GGCTAACCAC GGGCATGGTC ACCAAGGAAT GGACCGCCAT TCACCGTAAG
CACCACGCCA AGTGCGAAAC CGAAGAGGAT CCGCACAGCC CGCAGACCCG AGGCATCCGC
AAGGTGCTGA TGGAAGGCGC GGAGCTGTAT CGCGCTGAGG CCAAGAACAA GGAAACGATC
CAGAAGTTCG GCCACGGTAC GCCAGACGAT TGGGTCGAGA AGAACGTGTA TTCGAAGTTC
ACGTGGCAGG GCGTCGGTTT GATGCTGATC CTGGACGTGC TGATGTTCGG CGCGCTGGGC
CTCACGGTGT GGGCGGTGCA GATGCTGTGG ATTCCGATCC ACGCTGCCGG CATCATCAAT
GGTTTGGGCC ACTTCTGGGG CTACCGCAAC TTCGACTGCG AAGACGCTTC GACCAACGTG
TCGCCGTGGG GCATCATCAT CGGCGGCGAA GAACTGCACA ACAACCACCA CACGTACGCT
ACGTCGGCCA AGTTTTCGGT CAAGTGGTAC GAGTTCGATA TCGGCTGGGG CTACATCCGC
GCGCTGGAAA TCGTCGGTTT GGCGAAAGTC AAGAAAGTGG CGCCCAAGGC CCGTTTTGGC
GACGTGAAGC CGGTCGACCA GAACACGCTG GAAGCCATCA TCGCCAACCG CTACGACGTG
ATGGCCCGCT ACGCGAAGAC CGTCAAGGCG GCCTACCGCC AGGAGCTGGC CAAGCTGAAG
GACTCGCGCG CTGTCGAGTA CCGCGCACTC AAGCCGGCCC GCAAGTGGTT CCACCGCGAC
GAGACGAAAC TGGGCGCGCC GCAGCGCGAG CAGCTCTCCC AAATCGTGTC GGACCATTCG
GCGCTGCACA CCTTCGTTGA GATGCGCCGT GAGCTTGGCG CCCTGTGGGG CCGATCGAAC
GCCACGCGTG AGCAACTGCT GTATCAGCTG CAAGAGTGGT GCAAGCGTGC TGAGGAAAGC
GGTATCCACG CGCTGCAGGA ATTTGCTGTG CGCCTGCGCC GTTACGCCTG A
 
Protein sequence
MIDSFLTFLA NGTLDWAWWQ ILIFTLVMTH ITIASVTIFL HRCQAHRALD VHPIAGHFFR 
FWLWLTTGMV TKEWTAIHRK HHAKCETEED PHSPQTRGIR KVLMEGAELY RAEAKNKETI
QKFGHGTPDD WVEKNVYSKF TWQGVGLMLI LDVLMFGALG LTVWAVQMLW IPIHAAGIIN
GLGHFWGYRN FDCEDASTNV SPWGIIIGGE ELHNNHHTYA TSAKFSVKWY EFDIGWGYIR
ALEIVGLAKV KKVAPKARFG DVKPVDQNTL EAIIANRYDV MARYAKTVKA AYRQELAKLK
DSRAVEYRAL KPARKWFHRD ETKLGAPQRE QLSQIVSDHS ALHTFVEMRR ELGALWGRSN
ATREQLLYQL QEWCKRAEES GIHALQEFAV RLRRYA