Gene Rpic_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2716 
Symbol 
ID6289100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2829051 
End bp2829950 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID642626288 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_001900273 
Protein GI187929786 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA CACAGATGAA CACGACGCGT CTCGCCCCTG CGGCTGAGGC AATTTTCGAT 
GGCTTTGGCC CGGCACTGCG CGAGGCGTTG TCCGCGAATG TGGCCGCAGC CATTGCCGAG
GACGTTGGCA CGGGCGACCG CACTGGCTTG CTGATCCCCG CCGATCGCCT TGCGCGCGCG
CGCGTGATCG TGCGTGAGCA CGCCGTGCTC TGCGGCACAC CCTGGTTCGA TGCGTGCATG
CGCGCCGTTG ACCCGACGCT GCGGGTCACG TGGCGTCAGC ACGAAGGCGA TCGCATGGCG
CCCGATTCCG TGGTGTGCGA GATCGAGGGC CCGGCGCGTT CGCTGTTGAC GGCTGAGCGC
CCGTCGCTGA ACTTCCTGCA GTTGCTGTCC GGTGTGGCGA CGGCGACTTC GCGTTACGCC
GCAGCCGTCG AAGGCACGCG CGCCCGCGTG CTCGACACAC GTAAGACGCT GCCGGGCCTG
CGCCTGGCGC AGAAGTACGC CGTGCGGATC GGTGGCGGCG AGAATCAGCG CTTAGCCTTG
TACGACGGCA TCCTGATCAA GGAAAACCAC ATCGCTGCGG CAGGTGGCGT GACAGCGGCC
CTGCGTGCGG CGCAGGCGCT GAACGCAGGC GTGACGATTC AGGTTGAGGT GGAAACGCTC
GCGCAGCTGG ATGAAGCACT GGCGGCAGGT GCCACGTCCG TGCTGCTCGA CAACTTCGAA
CCGCCCGCGA TGCGCGAGGC TGTGCGCGTA ACGGCGGGCA GGGCGCTGCT CGAGGTGTCC
GGCGGCGTAA ACATCGAGAC GATCCGCACC TTTGCCGAGA CCGGCGTGGA CCGAATCTCC
GTCGGCGCGC TCACGAAGGA CGTGCGCGCA ACCGACTTCT CTTTGCGGAT CGTCGACTAA
 
Protein sequence
MTATQMNTTR LAPAAEAIFD GFGPALREAL SANVAAAIAE DVGTGDRTGL LIPADRLARA 
RVIVREHAVL CGTPWFDACM RAVDPTLRVT WRQHEGDRMA PDSVVCEIEG PARSLLTAER
PSLNFLQLLS GVATATSRYA AAVEGTRARV LDTRKTLPGL RLAQKYAVRI GGGENQRLAL
YDGILIKENH IAAAGGVTAA LRAAQALNAG VTIQVEVETL AQLDEALAAG ATSVLLDNFE
PPAMREAVRV TAGRALLEVS GGVNIETIRT FAETGVDRIS VGALTKDVRA TDFSLRIVD