| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2700 |
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| Symbol | |
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| ID | 6287408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2813040 |
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| End bp | 2814707 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642626272 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001900257 |
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| Protein GI | 187929770 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCGC CTGAGCCCGC CCCTGCAACG TCGTCGCACG GCGCCTGGCT GCGCGTTGCG
CCGCTGGCGC TTTGGCTGTC GGTGGCGGTG GTGGGCGTAG GCGCCTCATG GTTTGCCGCC
TGTTTCGTGG CGGATTCGAT GGGTGCGCGC GACATGCAGC AGATGGTCGA TGCGCGGCGC
CAGTTGGCTG CGCAGGTAGC GGAGGGAATG TCGAGCCAGA TCACCGCCGA CGTGGCCCTG
CTGCGCGCGC TGCCGCAGAC GCTCGCGCAG ATCGACGCCA TCCCGCGCGC GGTGGCGCGC
GTCGACACCC GGCGCTGGAA CCTGATGGAC CAGGGCTCAT GTGCCGAAGA GGCGATGTCG
CACCCGGAAG TGGTCGACAT CGATGCTTTC CTCAACGCCA CCGCAGGCAA TCTCGGGCTG
GACTACGTGT GGGTCGTGAA CCAACACAAT TACGTGGTGC TGGCCAATAA CGCCGGTCAT
GCCGATTCGT TCGTCGGCGT GCAGTTGAGC ATGCAGCCGT ACATGAAGGA GGCGATGCTG
GGTGGCCTGG GCGAGCAGTT CACGATCGGC CCGGTGACGG GCGTGCCGGG CCTGTTCTTC
GCCGCGCCGG TATATGACGC CGGAGGTTAC CTGGTCGCAA CAATGGGCAC CAAGGTGAGC
CTCGCGAGGC TGCAGCACTG GGTATCGCAC CCGACATCGT TGGTGACCGA TCCGAACGGC
TTGATCATTC TGTCCACCGA TGCATCGCTG GTCGGCAAGG TCCTGCCGGA TGCTCGCCTG
CAGCACATGG GCGCCAGCGA CCGGTACAAC GCCTACCAAC GCGTCGACTT CGAGCCCTGG
CCCTATCAGC CTACCGCGAA GGCGCATCGC GATGTGCCCG CCTGGGTGCC GGCCGAGGTG
CGCGATACGC TGGCCTGGCG CGAGGGCAGT GCGATGCCAT CGCTGACCGT GTCGCGCAAT
GCCAGTGCGG ACCTCACGGT CGTCGTGGCC GAGCCGCTGC CGGCGTGGGG CCAGCAGATC
GCCAACCATG CGCGCAACCG CATGATCGGC TTTGTGTTGT TCGTGAGTGT GTTGGTGACG
TTCGCGCTGG TGGCGTGGTC TTTGGTGCGC GAGCGGCAGC ACCACCGCGT GACGCGCCAT
CTGAACCAGC GGCTGCAGCG CACCAACAGC GCGCTCGCCA ACGAGGCGCA TTTCGATCAT
CTGACCGGTG TGCTGACGCG CCGCCGGTTC CTGGCGCTGT TCGATACGGT GCTCGCGCGT
GCGCACAATC GTGCCGAACC GCTTGTGCTC GTGCTGGCCG ATCTGGATCA CTTCAAGCGC
ATCAATGACA CATGGGGCCA CGCTGTGGGG GACATGGCGC TGCAGCGCTT TGCGTCGCTT
GCCACGGGCG TGCTGCGCAG CAGTGATCTG GTGGGGCGTT TGGGCGGCGA GGAATTCGCC
ATGGTGATGG GACGCACCAC GCTGGAAACC GCCACCGAGG TGGCCGAGCG CCTGCGTACG
GCGGTGGCCG AGACGGACGA AAGCTTCCCG ACCGGGCTGT CGATGACCGT CAGCATGGGC
ATGACGGGCT GCCGGCCGGG CGATACCGCG TCGGAAATGC TCAAGCGCGC CGATCTGGCG
CTGTATCGCG CCAAGGAAAG CGGACGTAAC CGGCACGTGG CCGGCTGA
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| Protein sequence | MKAPEPAPAT SSHGAWLRVA PLALWLSVAV VGVGASWFAA CFVADSMGAR DMQQMVDARR
QLAAQVAEGM SSQITADVAL LRALPQTLAQ IDAIPRAVAR VDTRRWNLMD QGSCAEEAMS
HPEVVDIDAF LNATAGNLGL DYVWVVNQHN YVVLANNAGH ADSFVGVQLS MQPYMKEAML
GGLGEQFTIG PVTGVPGLFF AAPVYDAGGY LVATMGTKVS LARLQHWVSH PTSLVTDPNG
LIILSTDASL VGKVLPDARL QHMGASDRYN AYQRVDFEPW PYQPTAKAHR DVPAWVPAEV
RDTLAWREGS AMPSLTVSRN ASADLTVVVA EPLPAWGQQI ANHARNRMIG FVLFVSVLVT
FALVAWSLVR ERQHHRVTRH LNQRLQRTNS ALANEAHFDH LTGVLTRRRF LALFDTVLAR
AHNRAEPLVL VLADLDHFKR INDTWGHAVG DMALQRFASL ATGVLRSSDL VGRLGGEEFA
MVMGRTTLET ATEVAERLRT AVAETDESFP TGLSMTVSMG MTGCRPGDTA SEMLKRADLA
LYRAKESGRN RHVAG
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