| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2663 |
|---|
| Symbol | cobT |
|---|
| ID | 6288337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2776479 |
|---|
| End bp | 2777543 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626234 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_001900221 |
|---|
| Protein GI | 187929734 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAA CCATGTACAT TCCGCCATTT GACGATGCGT TGCGCGTGCG CCTGCAGGCG
GCCGTGGACA GCAAGACCAA GCCGCTCGGC GCGCTGGGCC GGCTTGAATC GCTGGCCGTG
CAGATCGGCC TGATCCAGAA CACCGACACA CCGCAGCTGA CGCGCCCCGC GATGGTGGTG
TTTGCCGCAG ACCACGGCAT CGCGCACGCA GGCGTGAGCG CGTACCCTCA AGCGGTGACC
GCGCAGATGG TGCTCAATTT CATCGCGGGC GGTGCAGCCG TCAACGTGTT CTGCCGCCAG
CATGGGTTTG CGCTGGAGGT GGTAAACGCC GGTGTCGCCG CACCGTTGTG GGCGGCAGAT
GCGCCGGGCC TGGTCGATGC ACCTGTCGGC CCCGGCACAC GCAACTTTGC CGACGAGAGT
GTTGAGCAAG CCGCCATGAC CACTGAGGAG CGCGACCGCG CCATGGCGCT CGGCGCGCAA
CGCGTGGCAC ACCATGCTGC GCTTGGCACC AACGTGATCG CGCTGGGCGA AATGGGCATC
GCCAATACGG CGTCTGCCGC GTGCCTGATG GCGCGCTTAT GCAATTTGCC GGTCGCGCAA
TGCGTTGGCC GCGGCACCGG GCTCGATGAT GACGGCCTGG CCCACAAGCG CGCCGTGCTG
GAAGCAGCGA TGGCCAGGCA CGCTGACGTA CGCGAGCCGC TGGACGTGCT TGCGTGCTTC
GGCGGCTTCG AGGTCGCAGC GATGGTGGGG GCGGTGCTTG AGGCGGCGCA GCGCCGCATG
GTCATCCTCG TCGACGGGTT TATCGCGACG GCCGCCGTGC TGGTGGCCGC GCACGTGGCG
CCCGATGTGC TGCGCTTCTG CGTGTTCGGG CATGTGTCGG ACGAGCGCGG GCATCGCGCC
TTGCTGGAGC TGCTCGATGC GCGGCCGCTG CTGTCGCTGT CGTTGCGGCT GGGCGAGGGC
AGCGGCGCGG TGTTGGCGTA TCCGGTGGTC GTGTCGGCGG TGGCGTTCCT GCGCGAAATG
GCGACCTTCG CCAGCGCAGG CGTGAGCGAG CGCGCATCGC CATGA
|
|---|
| Protein sequence | MNQTMYIPPF DDALRVRLQA AVDSKTKPLG ALGRLESLAV QIGLIQNTDT PQLTRPAMVV
FAADHGIAHA GVSAYPQAVT AQMVLNFIAG GAAVNVFCRQ HGFALEVVNA GVAAPLWAAD
APGLVDAPVG PGTRNFADES VEQAAMTTEE RDRAMALGAQ RVAHHAALGT NVIALGEMGI
ANTASAACLM ARLCNLPVAQ CVGRGTGLDD DGLAHKRAVL EAAMARHADV REPLDVLACF
GGFEVAAMVG AVLEAAQRRM VILVDGFIAT AAVLVAAHVA PDVLRFCVFG HVSDERGHRA
LLELLDARPL LSLSLRLGEG SGAVLAYPVV VSAVAFLREM ATFASAGVSE RASP
|
|---|
| |