Gene Rpic_2585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2585 
Symbol 
ID6289037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2693843 
End bp2694511 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID642626157 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001900144 
Protein GI187929657 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.74986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.429786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTA TGAAATTCAT CTGTGACAGC GAGCGCTGCA TCGAATGCAA CGCCTGCGCC 
ACGGCCTGCA AGAACGAACA CGAGGTGCCC TGGGGCGTGA ACCGTCGCCG CGTGGTGACG
ATCAACGACG GCATGATCGG CGCGGAGAAA TCCATCTCGG TGGCGTGCAT GCATTGCTCC
GATGCGCCGT GCATGGCGGT CTGCCCGGTC GACTGCTTCT ACCGCACCGA AGACGGCGTG
GTGCTGCACG ACAAGGACGT CTGCATCGGC TGCGGCTACT GCTCGTATGC GTGCCCGTTC
GGCGCGCCGC AGTTCCCGAG CCAGGGCACG TTTGGCGTGC GCGGCAAGAT GGACAAGTGC
ACGTTCTGCG CGGGCGGCCC CGAGAAGAAC GGCAGCGAGG AAGAATTCGA AAAGTACGGC
CGCAACCGCC TGGCCGAAGG GAAGCTTCCG CTGTGCGCGG AAATGTGCTC GACGAAGGCG
CTGCTCGGCG GCGACGGCGA TGTGATTTCC GACATCCTGC GTAACCGGGT CATGAAGCGC
GGGAAGGGCG CGGAGTTGTT CGGGTGGGGC ACGGCCTATG GCGGCGCGCA GGGCAAGGGC
GGTCAGGCGG CACCGGCAAC TCCGGCCGCA CCGGCCAAGC CGGCTTCGGC GTCGGGAGCG
CAATCATGA
 
Protein sequence
MARMKFICDS ERCIECNACA TACKNEHEVP WGVNRRRVVT INDGMIGAEK SISVACMHCS 
DAPCMAVCPV DCFYRTEDGV VLHDKDVCIG CGYCSYACPF GAPQFPSQGT FGVRGKMDKC
TFCAGGPEKN GSEEEFEKYG RNRLAEGKLP LCAEMCSTKA LLGGDGDVIS DILRNRVMKR
GKGAELFGWG TAYGGAQGKG GQAAPATPAA PAKPASASGA QS