| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2563 |
|---|
| Symbol | |
|---|
| ID | 6289848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2669282 |
|---|
| End bp | 2670514 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626136 |
|---|
| Product | protein of unknown function DUF482 |
|---|
| Protein accession | YP_001900123 |
|---|
| Protein GI | 187929636 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.871216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTC GCCCCCTTGC TCCCGAGCCT CAAGCGCGCG CTGGTTCGCG ACACGAATTG
ACCGATTATC GCACGCGACT TGTGACCGAT CTGCGTGACA TCGGCCGCGA TGCCTGGGAT
GCCCTGCTCG CCCTGCAGCC CGAGGCAACG CCTTTTCTGC GCTTCGATTT CCTGCACGCC
CTGCATGCGA GCGGCAGCGC GTCGCCCGAC ACCGGCTGGT CGCCGCAATA CCTGACACTG
TGGCAAGACG GCCCCGACGG TGAAGTGCTC GCCGCCGCTG TGCCGCTGTA TGTGAAAGGT
CACTCCTATG GCGAGTACGT CTTCGACTGG GCCTGGGCCA ATGCGTACGC GCAGCACGGG
CTCGAGTACT ACCCGAAATG GCTGTCGGCC ATCCCTTTTA CGCCGGTGCA GGGCGCGCGG
CTGCTGGCGC GGGATGCGGC TGCGCGCGCA GCGCTGGTCG AAACGTTGCT GGCAGTTGCG
CGCCAGAGCG CGTTGTCATC GCTGCATGTG CTGTTTCCCA CTGCCGACGA AGCCGAGCAA
CTGCACGCCG CAGGCATGCT GCTGCGGCAA GGGGTGCAGT TCCACTGGTG CAATCCGGGC
TTTGCAAGCT TCGACGATTT TCTGGGCGCG CTGGAACAGA AGAAGCGCAA AAATATCCGC
GCCGAGCGCC GCCGCGTGCA CGACGCCGGT ATCACGTTCC GCCACGTGCC CGGCGCAGCC
GCGACGGACG CGGACTGGCG CTTCTTCCAC CGCTGCTATC GCACCACCTA CCGCGAGCAT
CACTCGTCAC CGTATCTAAA CCTGGAGTTC TTCCGCCAGA TCGGGCAGAC GATGCCGGAA
AACCTCCTGC TGGTGATTGC CTCGCGTGAT GGCAATGACA TCGCCAGCGC GCTGCTGGTG
ATCGACATGC GCCCCGAGGC GTCCGTCATG TACGGCCGCT ACTGGGGCGC GATCGAGCAT
CACCCCTGCC TGCACTTTGA GACGGCGTAT TACCAGCCGT TGACGTACTG CATCGCGCAC
GGCATCCGCA CGTTCGAAGG CGGAGCGCAA GGCGAACACA AGATGGCGCG CGGCTTCGAG
CCCGTGGCGA CGCTGTCGGC ACACTGGCTG GCGCACCCCG CATTTGCCGA TGCCGTGGGC
AGGTTCCTCG ACCGCGAAAC GGCCGGCATG GAAGCGTATC TGGACGAACT GACGGACCGC
TCCCCGTTCA GGCAGCGGCC GGGATCGGAT TAG
|
|---|
| Protein sequence | MTSRPLAPEP QARAGSRHEL TDYRTRLVTD LRDIGRDAWD ALLALQPEAT PFLRFDFLHA
LHASGSASPD TGWSPQYLTL WQDGPDGEVL AAAVPLYVKG HSYGEYVFDW AWANAYAQHG
LEYYPKWLSA IPFTPVQGAR LLARDAAARA ALVETLLAVA RQSALSSLHV LFPTADEAEQ
LHAAGMLLRQ GVQFHWCNPG FASFDDFLGA LEQKKRKNIR AERRRVHDAG ITFRHVPGAA
ATDADWRFFH RCYRTTYREH HSSPYLNLEF FRQIGQTMPE NLLLVIASRD GNDIASALLV
IDMRPEASVM YGRYWGAIEH HPCLHFETAY YQPLTYCIAH GIRTFEGGAQ GEHKMARGFE
PVATLSAHWL AHPAFADAVG RFLDRETAGM EAYLDELTDR SPFRQRPGSD
|
|---|
| |