Gene Rpic_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2505 
Symbol 
ID6286851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2621058 
End bp2621831 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID642626081 
Productprotein of unknown function DUF347 
Protein accessionYP_001900069 
Protein GI187929582 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.534446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGT GGCAGGTAAG TGACGCATGG AACAAGGTGC CCGAGATTGC ACTGTCGTTT 
TGGATCGTCA AGATCATGTC CACGACGGTG GGCGAGACGG GAGCCGATTT CCTGGCCGTG
AATGCCGGGT GGGGCCAAGC TGCAACGCGA GCCGTGATGG CCGCATTGTT GGCAGCTGCC
TTGTTTGCGC AGCTGCGGTC TCGCCGCTAT ATCCCGTCGA TCTACTGGCT CACGGTCGTC
CTGGTCAGCG TGGTCGGCAC GCAGATCACG GATCTGTTGA CGGATGGGTT GGGTATCAGC
CTTTACATCA GCACCACCGC GTTTGCTCTG CTGCTCGCTG CCATCTTCTT CGTTTGGTAT
CGCGTCGAAC GAACGCTCTC GATCGACTCG ATCGTCACGC GTCGTCGGGA GCTGTTCTAT
TGGGCCGCCA TCCTCTGTAC GTTTGCACTG GGAACCGCGG CGGGCGATTT GGCGACGGAA
GCGCTGGGCC TTGGCTTCAC GTGGGGAGCC GTGGTGTTCG GCACGTTGCT CGGCGTCACG
TACGCCGCCT GGCGTATCGG TGGCAACGCC GTGCTCACGT TCTGGATCGC ATACATCCTG
ACCCGACCCT TCGGCGCGGC GCTCGGCGAC TTGCTCACAC AAGCAAAAAC CTACGGCGGT
CTCGGCATGG GCGCCATGTG GACCAGTGCC CTGTTCCTCA CGGTGATTGT CTTACTGGTG
GCGGCTGAGC AGTTCGGCAT GGGAAGAAGC CGAGCTGTAG AGGCCACCGA ATAG
 
Protein sequence
MNRWQVSDAW NKVPEIALSF WIVKIMSTTV GETGADFLAV NAGWGQAATR AVMAALLAAA 
LFAQLRSRRY IPSIYWLTVV LVSVVGTQIT DLLTDGLGIS LYISTTAFAL LLAAIFFVWY
RVERTLSIDS IVTRRRELFY WAAILCTFAL GTAAGDLATE ALGLGFTWGA VVFGTLLGVT
YAAWRIGGNA VLTFWIAYIL TRPFGAALGD LLTQAKTYGG LGMGAMWTSA LFLTVIVLLV
AAEQFGMGRS RAVEATE