| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2497 |
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| Symbol | |
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| ID | 6286295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2610448 |
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| End bp | 2613069 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626073 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001900061 |
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| Protein GI | 187929574 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.842174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTCGC CTATCAGCCG TTCGGAGAAG AGCACCAGCC GTGTGCGCAA CGCCGCACCG
TGCCTTGCAG GCGGCGTGGC TGCGCTCACT GCCGCGGGGC TTTACTCGCC CGCGTTTGCC
GAAGACCAGA TCGTGGCGGT GGCATTGCCG ACCGCGCAGG TCGTCGGCTC GACCCCGATC
GACAGCATTG GCGTGCCGCT GTCGCAGTTT CCTGCCAATG CGCAGCGCGT GAGCGCGAAG
GATGCGCGCG AGCAACGCAA CTCCAACCTG GCGGACCTGC TCAACGACAA CCTGGGTCAG
GTGAGCATCG GCAACGGGTC GGGCAATCCG TACCAGAACG ACATCAACTA CCGCGGGTTT
CAGGTGTCGT CGCTGCTGGG CGTGCCCATC GGCGTGTCGG TCTACTTTGA CGGCGTGCGG
ATGAACGAGC CCTTCGGCTC CATCGTGAAC TGGGATCTGA TTCCCATGAA CGCGATGTCC
AGCGTCAACA TCCTGCCGGG CTCCAACCCG ATGTTCGGCC TCAACACACT GGGTGGCGCG
CTTGTCGTCA ACACCAAGAA CGGGAAGGAC AACGCCGGCA CGTCGATTGA GGCGCTGGGC
GGGTCGTTTG GCCGCCGTGC GCTGAGCTTT GAGACCGGTA TCGTCGACAA GGCTCACGGC
ACCGATTACT TCGTCGCCGG CAACTTCGAC CGGCAGGACG GCTTTCGCGA CCACTCGGGT
TCGAACGTCA AGCAACTGTA TGGAAAAGCG CGGTGGCACG GCAACGACGG CGCTACCCAG
CTCGAGCTGT CGGCCGCACT GGCAGATACG TCGCTGAGCG GCACGCAGTC GTTGCCGATG
GACATGATGG CGAACCGCAG CGCCGCCTAT ACGTGGCCCG ACACCATCTC AAACCGGATG
GCGCTGCTGA ACCTGACGGG CAGCCATTGG TTGAACGACA CGAACCAACT GGCCGGCAGC
ATCTACTACC GCAAGGCCAG CCTTCACAAC GTCAACAGCA ACGCACAGCT GGATGACGGC
TGCTTCAACG ACGACGGCTC GCTGGCAACG ACCGCTGCAG GTGGCACCAC CACGTACAAA
TGCGCGAACA AGGCGCCCAA CGGCACGGCA GTCAATGCAG TGACCGGCGC GAATGCGCTT
GCGCTCGGCT ACGGCCGCTG GACCAACGCC ATCAATACCA GCGTCGTCGA TTCCGCCACG
CATGAGGACA CGGTGGGCAC GTCCCTGCAG TGGTCGAACT TCAGCCAACT TGCGGGACAC
GACAATACGT TCACCTTCGG TAGTGCGTTC GATCATTCGC GCATCACGTA TGACCAGACG
ACCTACCTGG CACGGTTGAT CAACTATCAG ACAGTGGTGA GCCCGAACCA GACATACGGA
TTCACCGCCA ATGGATCGGC ACCGTCGACA TCGAACCCCG CGTTGTTCAC GGGCAGCAAC
GTCATTGGCG CGGTCAACCT GTCGTCCAAC ATCAACAACT TCAGCCTGTA CTTCACCGAT
ACGTTGAGCG TGACGGAGAA GCTGAGCGTG ACTGCCTCTG GAAGCTTCAA CTACACAACG
CTCAACCAGG GCGGCGCCAA CAATAAATAC CTGAACGAAG ACGGCGGTTA CTCCTGGACG
GACCAAGTAT CGGGCGTGTC GTACTACAAC CCCGGCTACG CGAATGCCTA TCGGTACTCG
AATGCGGGAT CGGGCGCGGC AACCGCTCCG AACGGTGTCC CGCCGGGGGC GGTGGCCGGA
CCGGAAACCA ACAGCCTGGC CGGCTCGCAT CGCTATCGCC GTTTCAACCC GGCGCTCGGG
TTCAACTACG ACCTGGGCGC GGGGCAGGGC ATCTTCGGCA GCTACAGCGA ATCGATGCGC
GCTCCGACAT CGATTGAATT GTCTTGCGCC GATCCGAACA GCCCGTGCTC GCTCCCCACG
GGGTTCAACG GCGATCCGGA CCTGAAAGCC GTGGTAGCCA AAACCATCGA ATTCGGCGGC
CGCGGAAAGC TGGGCAAGTC CACCTACTGG AGCGCGGCTG TCTACGACTC GCGCCTGAGC
AATGACATCC AGTTCATCGC CACGTCAAAC ACGTACGGCT ACTTCGCCAA TGTCGGCAAG
ACCGAACGGC GCGGAATGGA ACTGGGCGCC AGCACGAAGA TCGACAAGTG GTCGTTGTCG
GCCAACTTTG GTTATGTCGA TGCGATCTAC AAGTCGGCAT TCACCACGGC GAGCGGGCAG
CACGTGGTCA GCGGCAACAA GATCCCGGGC ATCCCCGCGA AGACGCTCAA GCTCGGCGCG
TCGTACGCCT TTAGCCCGAA CCTGTCGATG GGCGGGAACG TGATCCTGGT CAGCAAGCAG
ATCGCACACG GCAACGAAAG CAATGCCGAC CCGAACGGCG AGGTGGCCGG CTACGGCCTC
GTCAATCTGA ACCTGCACTA CAAGCCGACG AAACATCTCG AGATTTCGGC GTACATCAGC
AACCTGTTCA ACAAGCGCTA TTCCACGTAC GGCCTGTCGG GCATGCGGAG CATCTACACG
TTGGCGAAGC AGCAGTTCAT GACGCCGGCA CCGCCGCGCG CGATCTGGAT TGGCCTGACG
TATTCGTTTG GAGGCAAGGC CGCCGGTGCC GATGCGGACT GA
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| Protein sequence | MHSPISRSEK STSRVRNAAP CLAGGVAALT AAGLYSPAFA EDQIVAVALP TAQVVGSTPI
DSIGVPLSQF PANAQRVSAK DAREQRNSNL ADLLNDNLGQ VSIGNGSGNP YQNDINYRGF
QVSSLLGVPI GVSVYFDGVR MNEPFGSIVN WDLIPMNAMS SVNILPGSNP MFGLNTLGGA
LVVNTKNGKD NAGTSIEALG GSFGRRALSF ETGIVDKAHG TDYFVAGNFD RQDGFRDHSG
SNVKQLYGKA RWHGNDGATQ LELSAALADT SLSGTQSLPM DMMANRSAAY TWPDTISNRM
ALLNLTGSHW LNDTNQLAGS IYYRKASLHN VNSNAQLDDG CFNDDGSLAT TAAGGTTTYK
CANKAPNGTA VNAVTGANAL ALGYGRWTNA INTSVVDSAT HEDTVGTSLQ WSNFSQLAGH
DNTFTFGSAF DHSRITYDQT TYLARLINYQ TVVSPNQTYG FTANGSAPST SNPALFTGSN
VIGAVNLSSN INNFSLYFTD TLSVTEKLSV TASGSFNYTT LNQGGANNKY LNEDGGYSWT
DQVSGVSYYN PGYANAYRYS NAGSGAATAP NGVPPGAVAG PETNSLAGSH RYRRFNPALG
FNYDLGAGQG IFGSYSESMR APTSIELSCA DPNSPCSLPT GFNGDPDLKA VVAKTIEFGG
RGKLGKSTYW SAAVYDSRLS NDIQFIATSN TYGYFANVGK TERRGMELGA STKIDKWSLS
ANFGYVDAIY KSAFTTASGQ HVVSGNKIPG IPAKTLKLGA SYAFSPNLSM GGNVILVSKQ
IAHGNESNAD PNGEVAGYGL VNLNLHYKPT KHLEISAYIS NLFNKRYSTY GLSGMRSIYT
LAKQQFMTPA PPRAIWIGLT YSFGGKAAGA DAD
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