Gene Rpic_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2415 
Symbol 
ID6287919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2515731 
End bp2516741 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content66% 
IMG OID642625992 
Productbeta-lactamase domain protein 
Protein accessionYP_001899981 
Protein GI187929494 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.991306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGC TCACCTCTGC CGCCGTGGCT ACCGCGATGG CGGCGTCCAT CGGATTCGCC 
CACGCCCAAC CCGCAACAGG CGCCGCCGGC CCTGCTGTCA CCGCCGCCGC TACGCAGCAA
CGCACCCAGG TGCCCGGCTA TTACCGCATG GCGCTGGGCG ACGACGTTGT GACCGCGCTC
TACGACGGCT ACACCGATCT GCCTGCTAAG ACCCTGCTTG GCCTGAACGC GCAATCGGTG
CAGAGCCTGC TGGCGCGGAT GTTTGTATCG AACACGCCGG GCATGCAGAC GGCGGTGAAC
GGTTTCCTGA TCGACACGGG TGATAAACGC ATCCTCGTCG ATACGGGTTC TGGTACGTGC
TTTGGCCCGA CGATGGGCGG CCTGGCCGGC AACGTTCGCG CGTCCGGCTA CCAGCCCGAG
CAGATCGACG CAGTGCTGCT GACGCACCTG CATCCGGACC ATGCATGCGG CCTGTTGACG
CCGCAAGGCC AACCGGCCTT TGCGAATGCG CAGGTGTATG TGGCCGCACC AGAAGCCGAT
TTCTGGTTGA GCGAAACGAT CGCCGCTTCC AAGCCAAGCG ACATGCAGCC GTTCTTCAAG
ATGGCGCGCG ACTCTGTGGC GCCGTATGCG GCAGCGGGCA AGCTCAAACA GTTCAAGCCG
GGCGACGAGG TCGTGCAGGG CGTGCGCTCG GTCGTCGCCA ACGGGCATAC GCCGGGGCAT
AGCGGCTATC TGTTTGCCTC GAAGGGACGC AGCCTGCTCG TCTGGGGCGA TATCGTGCAC
AGCCATGCGG TGCAGTTCCA GCACCCCGAG GTCGCGTTCG AATATGACGT CGACAAGAAG
GCTGCTGTCG CCACGCGCCG TAAGCTGTTA GCGGAAGCGG CGCGGGACAA GCTCTGGGTG
GCCGGCGCAC ATCTGCCGTT CCCGGGCCTG GGCCACGTGC GCCGCGACGG CAACGCCTTC
GCTTGGGTGC CGATCGAATA CGGCCCGCTG CGCACGGACC GCGCTGATTG A
 
Protein sequence
MRLLTSAAVA TAMAASIGFA HAQPATGAAG PAVTAAATQQ RTQVPGYYRM ALGDDVVTAL 
YDGYTDLPAK TLLGLNAQSV QSLLARMFVS NTPGMQTAVN GFLIDTGDKR ILVDTGSGTC
FGPTMGGLAG NVRASGYQPE QIDAVLLTHL HPDHACGLLT PQGQPAFANA QVYVAAPEAD
FWLSETIAAS KPSDMQPFFK MARDSVAPYA AAGKLKQFKP GDEVVQGVRS VVANGHTPGH
SGYLFASKGR SLLVWGDIVH SHAVQFQHPE VAFEYDVDKK AAVATRRKLL AEAARDKLWV
AGAHLPFPGL GHVRRDGNAF AWVPIEYGPL RTDRAD