Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2406 |
Symbol | |
ID | 6287886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2503181 |
End bp | 2503879 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625983 |
Product | Pirin domain protein |
Protein accession | YP_001899972 |
Protein GI | 187929485 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.481818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAA TCCGCCCCTC TCAAGATCGC GGTTACGCAG ACCATGGCTG GCTCAAGTCG TATCACAGCT TCTCGTTTGC CGATTACATG GACCCGCAGC ACGTTCAATT CGGGCCGCTG CGTGTCATCA ATGAGGACCG CGTCGCCGCC GGCATGGGCT TTGGCACCCA TGGCCACCGC GACATGGAAA TCATCAGCTA CGTGCTCGAC GGCGAGCTGG CGCACAAGGA CAGCATGGGC AACGGCAGCG TGCTGCGCCG GGGCGACGTG CAACGCATGA CGGCTGGGAC AGGTGTGCGT CACTCCGAGT TCAACCACGC GCAGGACCAG ACCACGCATT TTCTGCAGAT CTGGGTGCTG CCGGCGCAGT TGAACCTGAC GCCGGGTTAC GAAGAACGCC ATTTCGACGA GGCGGCCAAG CGCGGCAAGC TGGCCCTGAT CGCCAGCGCC GACGGCCGTG ACGGATCGGT GAAAGTGCAC CAGGACATGG CCCTCTACGC CGGCAAGTTC GATGGAGCAG AAACTGCGTC CCTGCCGATC GCCGCAGGCC GCCGCGCTTA TGTGCACGTC GTGCGCGGTA AGGTGAGCGT CAACGGTCGC ACGCTGGTGG GCGGCGACGC CGCCAAGCTG ACGCAAGAAG AGACGGTGAT GCTGTCTGGC GGCGAAGACA GCGAAGTGCT GGTGTTCGAT CTGCCGTAA
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Protein sequence | MIEIRPSQDR GYADHGWLKS YHSFSFADYM DPQHVQFGPL RVINEDRVAA GMGFGTHGHR DMEIISYVLD GELAHKDSMG NGSVLRRGDV QRMTAGTGVR HSEFNHAQDQ TTHFLQIWVL PAQLNLTPGY EERHFDEAAK RGKLALIASA DGRDGSVKVH QDMALYAGKF DGAETASLPI AAGRRAYVHV VRGKVSVNGR TLVGGDAAKL TQEETVMLSG GEDSEVLVFD LP
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