| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2401 |
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| Symbol | |
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| ID | 6289516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2495398 |
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| End bp | 2496678 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642625978 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001899967 |
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| Protein GI | 187929480 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0523174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT TGATGCAACG AGGCCGGACG CTGATAGCAA GCGCACCGGC GGCGCTGACC
GTGTTTGGAA TCGCCATCCT CCCGGCTTTC ATGCTGTCTG TGCGCGGCGC TGCCTTCCTG
TCGTTTTCGC TGCTGCTGGT CGCCGCGTTC GGGTGGATGC TGTCCGCGCC TGCGGCGGTC
ATGAGCCGAC TGCGAGCGAT GTGGCGTGAA CATCGTTGGT TGATTGTGGC GATGGCGGCC
ATGCCGACCG CGATGCTGAT CAGTGCGCAG TTGAACCCTG CCGCGCCGCG CAATGTGCCG
TTTGCCTATG GGCGGCTCTG GCTGTTCGGC TTGGCGCTGT TTGCGCTGTT GCAATTGCGG
CCTAAGCAGT TGGAGAGCGT GCAGTGGGGC TGCGTTGCGG GCGCGCTTGC CTCAGCTGTG
TGGGCTTATC TCGAATTGCG GGCGGGACGA GTTGGCATGG TCGGGGCGTT CTCCAATGCC
ATTCCGTTTG GCAACCTTTC GCTTCTGATG GCGTTGTTCG CCCTCATGTC AATTGGTTGG
ACGGAAGATG ACGGCTGGGC CCTGATTGCG CTGCGTCTGT TAGCTGGCTG TGCCGGGCTC
TATGCATCGT ATCTGTCGCA GGCGCGGGGC GGATGGATTG CAATCCCCGT ACTGCTGTTG
ATCGCCGTGG CGACGCTGCG GCATGTGAGC TGGAAAAAGC GATTGACGGC CTTGTTGCTG
TTCTTCGTGT TCCTGATTGC CGTATGCGTA TCGTCCAGTG TGGTCCGTAC CCGCTTCGAC
CAGGCCATGG AAGACATCCA CGCCTATCAG GCCGGCCAGA CCAACACGTC AGTTGGCATC
CGTTTCCAGC TGTGGAAAGC CGCCACGCTG ATGTTGACGC GCCACCCATT AGCCGGGGTG
GGGCGAGGCC AATTCGGGCC CGCTCTCAAG GCGATTCACG CCGAGGGCCT GATCACGCAG
GAAGCGACGG CCTTCGAGCA TGCCCACAAT GAGTTTCTAT ACAATGGCGC CACGCTTGGC
GTGCTGGGCA TCGGCGCATT GCTGGCGTTG TACCTGGTGC CCGCCGCCTA CTTTCTGCGC
GCCGCGCTGT GCGACGACCG CGTCTTGCGG ACGACGGGCG CGATGGGTCT CACGCTCTGT
GTCGGCTTTC TACTGTTTGG GCTGACCGAA GTGATGCTGA TCATCGCGCA GACCGTCGTG
TTCTATAGCG TGATGGTGGC CGTGTTCACC GCGCATATTC ACCGGCGCCG GCAGCAGCTT
GGCGCCGCTC CTGTTTTCTG A
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| Protein sequence | MSSLMQRGRT LIASAPAALT VFGIAILPAF MLSVRGAAFL SFSLLLVAAF GWMLSAPAAV
MSRLRAMWRE HRWLIVAMAA MPTAMLISAQ LNPAAPRNVP FAYGRLWLFG LALFALLQLR
PKQLESVQWG CVAGALASAV WAYLELRAGR VGMVGAFSNA IPFGNLSLLM ALFALMSIGW
TEDDGWALIA LRLLAGCAGL YASYLSQARG GWIAIPVLLL IAVATLRHVS WKKRLTALLL
FFVFLIAVCV SSSVVRTRFD QAMEDIHAYQ AGQTNTSVGI RFQLWKAATL MLTRHPLAGV
GRGQFGPALK AIHAEGLITQ EATAFEHAHN EFLYNGATLG VLGIGALLAL YLVPAAYFLR
AALCDDRVLR TTGAMGLTLC VGFLLFGLTE VMLIIAQTVV FYSVMVAVFT AHIHRRRQQL
GAAPVF
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