| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2339 |
|---|
| Symbol | |
|---|
| ID | 6286792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2442562 |
|---|
| End bp | 2443047 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642625916 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001899905 |
|---|
| Protein GI | 187929418 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.014293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTCG CATCTGACGT TAAGCACGTA GCCGCCAAGT TCCGTGCATT CCTCACTGAA
CGTGGTGCGG AGGTCCTGAA GCCGACAAGC GAGTGGGAAC TTATTCGCTT CAACTGTGCG
GCCGGTGTCG CCATTGTCTA CACCGATGCT CGTGGGCGTA CCACCTTTAC TGGTGAGTCG
CTAGCTGCAT GGAACGCATT CTGCAGCAGC GGCGCATGGA AAGCAGGCGT TGCCAAAACG
CGTAAGAAGC GCAGCCCAGT TGTGCAGACG CTTCTCGATC GCGACGGCGA TTGCTGTTTC
TACTGCTGGA AGGTCATGGA ACCCACCGAT CAAAGCGTCG AGCACTTGGT GCCGGTTGTT
CATGGTGGCC CCAACCACAT TAGCAATCTC GCGCTCGCTC ACCGCCATTG CAACGCGGCC
GCAAGACATC TTAGCGCGAT GGAAAAGATT CGGCGCCGTG AGCGCGCAAA GCCGGTAGGA
GCCTGA
|
|---|
| Protein sequence | MVVASDVKHV AAKFRAFLTE RGAEVLKPTS EWELIRFNCA AGVAIVYTDA RGRTTFTGES
LAAWNAFCSS GAWKAGVAKT RKKRSPVVQT LLDRDGDCCF YCWKVMEPTD QSVEHLVPVV
HGGPNHISNL ALAHRHCNAA ARHLSAMEKI RRRERAKPVG A
|
|---|
| |