Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2260 |
Symbol | |
ID | 6289357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2377600 |
End bp | 2378562 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642625832 |
Product | urate catabolism protein |
Protein accession | YP_001899826 |
Protein GI | 187929339 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0671776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACA ATAACTATCC GCGCGATCTC ATCGGTTACG GCAAGAACCC GCCGAACGCC AATTGGCCGG GCGGCGCGCG CGTCGCCCTG CAGTTCGTCC TCAACTACGA GGAAGGCGGT GAAAACTGCG TCTTGCACGG CGATGCCGGC TCCGAGCAGT TCCTCTCTGA GATCATCGGC GCCGCGGCCT ACCCGGCCCG CCACATGAGC ATGGAGGGGA TCTACGAATA CGGATCGCGC GCGGGCGTGT GGCGCATCCT GCGCGAGTTT GAAAAGCGCG GCCTGCCGTT GACGATCTTC GGTGTGTCGA TGGCCCTGCA GCGCCATCCG GACGTGACGC AAGCCTTCGT TGATCTGGGC CACGAAATCG CCTGTCACGG CTGGCGCTGG ATTCACTATC AGAACATCGA CGAAGCTACC GAGCGCGAGC ACATGCGCAT CGGCGTCGAG ATCATCCGCG AGTTGACTGG CAATGCGCCG CTGGGCTGGT ACACCGGCCG CGACAGCCCC AACACGCGGC GCCTGGTCGT CGAGCACGGC GGCTTTGCGT ACGACGCCGA CTACTACGGC GACGACCTCC CCTTCTGGAC CGAAGTCGAA ACCTCGTCCG GCGAGCACAA GCCGCACCTG GTGGTGCCGT ACACGCTCGA CACCAACGAC ATGCGCTTTG CCAGCCCGCA AGGCTTCAAC ACGGCCGACC ACTTCTACCA GTACCTGAAG GACGCCTTCG ACGTGCTGTA CGAAGAAGGC GATCCCAACG GCCTTGCGCA GCCGAAGATG CTGTCGATCG GCATGCACTG CCGCCTGCTG GGGCGCCCGG CGCGCTTCCG CGCGCTGCAG CGCTTCCTCG ACTACGTGCA ATCGCACGAC AAGGTCTGGA TCTGCCGCCG TATCGACATC GCGCAGCACT GGATCCAGAA CCATCCGTAT GCCAAGCAAC CCGTTTTGAG CACCACAGCA TGA
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Protein sequence | MTNNNYPRDL IGYGKNPPNA NWPGGARVAL QFVLNYEEGG ENCVLHGDAG SEQFLSEIIG AAAYPARHMS MEGIYEYGSR AGVWRILREF EKRGLPLTIF GVSMALQRHP DVTQAFVDLG HEIACHGWRW IHYQNIDEAT EREHMRIGVE IIRELTGNAP LGWYTGRDSP NTRRLVVEHG GFAYDADYYG DDLPFWTEVE TSSGEHKPHL VVPYTLDTND MRFASPQGFN TADHFYQYLK DAFDVLYEEG DPNGLAQPKM LSIGMHCRLL GRPARFRALQ RFLDYVQSHD KVWICRRIDI AQHWIQNHPY AKQPVLSTTA
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