Gene Rpic_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2205 
Symbol 
ID6288402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2315210 
End bp2315842 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID642625776 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001899771 
Protein GI187929284 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA CGACGATCAT CTTCTACTGT TTCGCGCTCG TGCTGGTGCT CGCAGCGCTG 
AAGGTCATCA CCGCGAAGAA CCCGGTGCAC GCGGCGCTGT TCCTCGTGCT CTCGTTCTTC
ACCGCGGCGG CGATCTGGAT GCTGCTCAAG GCGGAGTTTC TCGCCATCAC GCTGGTGCTG
GTCTACGTTG GGGCAGTGAT GGTGCTGTTC CTGTTCGTGG TGATGATGAT CGATATCGAC
ATCGAACACC TGCGACGCGA TTTCTGGACC TACGTACCGA TGGCAGCCTT CGTGGGCGTG
GTCATCATCC TGGAAATGGC TGTCGTGCTG ACCAAGACCT TCATGGGGCG CGTACAGCCC
GTGCAGGAGC TGCCGAAGGG CTTCACCGGC CCGAACACAC AGGCGCTCGG GAAGCTCATC
TATACCGATT ACATCTACGC CTTTGAAGTG GCTGGCGCGG TGCTGCTGCT GGCGATTGTC
GCGGCCGTGG CTCTGACCGC TCGCCGCCGC AAGGACACCA AGGCACAGAA CGTGTCTGAT
CAAATCCGCG TGAAGCGCAA GGACCGCGTG CGTCTGGTCT CGATGCCGGC GGAAAAATCG
GCTGGCGCAG CTTCGGCTGA ATCCAACAGC TGA
 
Protein sequence
MEITTIIFYC FALVLVLAAL KVITAKNPVH AALFLVLSFF TAAAIWMLLK AEFLAITLVL 
VYVGAVMVLF LFVVMMIDID IEHLRRDFWT YVPMAAFVGV VIILEMAVVL TKTFMGRVQP
VQELPKGFTG PNTQALGKLI YTDYIYAFEV AGAVLLLAIV AAVALTARRR KDTKAQNVSD
QIRVKRKDRV RLVSMPAEKS AGAASAESNS