| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2156 |
|---|
| Symbol | |
|---|
| ID | 6287621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2268260 |
|---|
| End bp | 2268814 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642625727 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_001899722 |
|---|
| Protein GI | 187929235 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0120946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT TCATCGTCGG CGCCTGTGCT GGCGTTCTTT CGCTGGCTGC ATCGCCATAT
GCAACCGCCC AGACTACGCC GGCAAAGCCG GCTGCCAAAA AGGCTCCGGC CAAGAAGAAG
GTCACCAAAA AGGCTGCTCC TGTTGCCGCC GCCAAGCCCG AAGGCGTGCA ATGGAAGTGC
GAACTCGGCA ACGAGCTCTA CATTACAGGC GACATGACGC GCGACCAGAT CATCAAGCTG
CACTGGAAGG GCAAGAACTA CGACCTGCCG CGCCAGCTGA CCCGCACCGG CGCCGACCGC
TACTTTGACC AGAAGACGGG CTTCGACCTA GTGGTCATCC CGGCCAAGGC CATGCTGTTC
GACCGCAACG AAGGCCACCG CCTGGCCGAT GAATGCCAGA CCGCCGAAAT GGCTGCCGGC
GCTCCGGCCC CGACGCAAGC CGGCGCCCTG CGCGCTCCGG CCGGCCTGCC GTTGATGATG
CCGGACAGCC CGGCACCGGC ACCGGCACCG GCACCGGCAC CGGCACCGGG CACGGCCCAA
CCGGCCCAGC AGTAA
|
|---|
| Protein sequence | MNKFIVGACA GVLSLAASPY ATAQTTPAKP AAKKAPAKKK VTKKAAPVAA AKPEGVQWKC
ELGNELYITG DMTRDQIIKL HWKGKNYDLP RQLTRTGADR YFDQKTGFDL VVIPAKAMLF
DRNEGHRLAD ECQTAEMAAG APAPTQAGAL RAPAGLPLMM PDSPAPAPAP APAPAPGTAQ
PAQQ
|
|---|
| |