Gene Rpic_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1996 
Symbol 
ID6286597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2105643 
End bp2106035 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content66% 
IMG OID642625564 
Productputative transmembrane protein 
Protein accessionYP_001899563 
Protein GI187929076 
COG category[S] Function unknown 
COG ID[COG3308] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC CCAACAACGT CGTCACCGAA TCCCGGGCAC TGGCTCTGCT CGGTGCAGCC 
AGCCTCATCG CGTTGATCCT CCTGTGTGCG GCGTGGGAGT TGTGGCTCGC GCCCGTGCGC
CCGGGCGGCT CCTGGCTGGC GCTCAAGGCG CTGCTGCTGG CATGGCCGCT GCCCGGCGTG
CTGCGCAAGA ACCGCTACAC GATGCAATGG GCGTCCATGT TCATCCTGCT GTTCTTTACC
GAAGGCATCG TGCGGGCGAC ATCGGACGTC GGGCTTTCGC GCTCGCTCGC ATGGGGCGAG
GTGGTGCTCA GCGTGGTGTT CTTCACCGCA ACCATCCTCT ACCTGCGACC ATTCAAGCGC
GCGGCCAAAG CACGCGCCGG CCACAGATCC TGA
 
Protein sequence
MTSPNNVVTE SRALALLGAA SLIALILLCA AWELWLAPVR PGGSWLALKA LLLAWPLPGV 
LRKNRYTMQW ASMFILLFFT EGIVRATSDV GLSRSLAWGE VVLSVVFFTA TILYLRPFKR
AAKARAGHRS