Gene Rpic_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1993 
Symbol 
ID6289851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2103331 
End bp2103648 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content63% 
IMG OID642625561 
Productputative transmembrane protein 
Protein accessionYP_001899560 
Protein GI187929073 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.072435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACCA CCGACACCCG CAGCTTCGGC AGCTTCGCCG AGTTCTATCC GTACTACCTG 
AGTGAGCACC GGGATCGCAC CTGCCGGCGC CTGCACTTTG TCGGCTCGAC GGTGGCGCTG
GTGTGTTTGA TCCTCCTGGT GTTCACGGGC AACCTGTGGT GGTTGCTGGG GGCGGCCGTG
AGCGGTTACG CGTTCGCGTG GGTCGGACAT TTCGGGTTCG AGAAGAACCG GCCCGCCACC
TTCCGCCACC CCTTCTACAG CTTGCTGGGT GACTGGGTGA TGTATCGCGA CATCTGGACG
GGCAAGATCC CGTTCTGA
 
Protein sequence
MGTTDTRSFG SFAEFYPYYL SEHRDRTCRR LHFVGSTVAL VCLILLVFTG NLWWLLGAAV 
SGYAFAWVGH FGFEKNRPAT FRHPFYSLLG DWVMYRDIWT GKIPF