Gene Rpic_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1979 
Symbol 
ID6288559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2089746 
End bp2090114 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content62% 
IMG OID642625547 
ProductEndoribonuclease L-PSP 
Protein accessionYP_001899546 
Protein GI187929059 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG AACTGAAGCG TTACAACGTC GAACATCGCT ATTCCGACGC GGCCGTCTAC 
AACGGCGTCG TCTACGTGGC CGGCCAGGTG CCCGAGACCA CGCTGGACGC CGGCATTGCC
GAGCAGACGG CGGAAGTGCT CGCCATCATC GATCGCGTGC TGGCCGCCAA CGGCAGCGAC
AAGACGCGCA TCCTGATGTG CCAGATCTTC CTCAAAGACA TCGGCGAGAT TGGTGAGATG
AACAAGGTGT GGGACCAGTG GGTCGCCGCT GATTCCAAGA ACTCGCCGCC GCGCGCCACC
GTTGAGGCCG CGCTGGCCAA TCCGAAGTAC CGTATCGAAA TCGTCGTGAC GGCCGCGCAG
AAAAGCTGA
 
Protein sequence
MSTELKRYNV EHRYSDAAVY NGVVYVAGQV PETTLDAGIA EQTAEVLAII DRVLAANGSD 
KTRILMCQIF LKDIGEIGEM NKVWDQWVAA DSKNSPPRAT VEAALANPKY RIEIVVTAAQ
KS