Gene Rpic_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1932 
Symbol 
ID6286542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2039191 
End bp2039505 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content64% 
IMG OID642625498 
ProductTM2 domain containing protein 
Protein accessionYP_001899499 
Protein GI187929012 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.533409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0149218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGA CCGCCCGCGA AATCATGCTG TACGACGCCC AGAAGAAGAG TCCGGGCGTT 
GCCTACCTCT GGTGGTTTCT GCTGGGCTTC CTGGGGGCGC ATCGCTTCTA CCTGAAGCGG
CCAGGCAGCG GTATCGCGCA GGCCATTGCC AACATCGGCG GCACATGGCT GGCGTTTCGT
GACATGGGTA ACACCGCGGG CTGGGTGCTG GCCGTCATCG GCGGGCTGTG GGTGCTGGTG
GACATGTTCC TGATTCCGGG TATGGTCCGC GCAAACAACA CGGCGCTCGC CGAGCGGCTT
TCGACCGCGC CCTGA
 
Protein sequence
MNQTAREIML YDAQKKSPGV AYLWWFLLGF LGAHRFYLKR PGSGIAQAIA NIGGTWLAFR 
DMGNTAGWVL AVIGGLWVLV DMFLIPGMVR ANNTALAERL STAP