Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1907 |
Symbol | |
ID | 6287271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2011099 |
End bp | 2012160 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642625471 |
Product | protein of unknown function DUF1016 |
Protein accession | YP_001899474 |
Protein GI | 187928987 |
COG category | [S] Function unknown |
COG ID | [COG4804] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0483682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.121025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC GCCCGCCTGC CCGCAGAAAA CTCGCACCGG TGGTGCGAGA AACGGTAGAT GCGCAGGATT ACGCCGCCTT GCTCACCGAG ATCAGGGCGC GCATCCAGGC TGCGCAATAT GCGGCCCTAC GGGCGGTCAA CAAAGAGCTG GTGGGACTGT ATTGGGACAT CGGCCAAATG ATCGTGGCGC GGCAGCAAAC CGAGGGTTGG GGTAAAGCGG TCGTGCAGCA ACTCGCCACA GACCTGCAGG CGAGCTTTCC TGGCACGGGC GGTTTTTCGG CATCCAACCT CTGGCGGATG AAGGGTTTCT TTGAGACCTA CCGCGACGCA ACAAAACTCG CACCTCTGGT GCGAGAAATC GGGTGGAGCC ATAACCTGCT CATTCTTGAG CGTTGCAAAG ACGCTCAAGA GCGCGAGTTC TACCTGCGCA TGACGCGCAA ATTCGGTTGG TCGAAAAGCG TTCTGGCACA CCAGATCGAC AACCAGAGCT ACGAAAAGTC ACTCCTGGGC CAGACCAATT TCGACAAGGC GCTGACGCCG GCCCTGCGCG CGCAAGCCAA GCTGGCGGTC AGAGACGAAT ACGCCTTCGA TTTTCTCGAA CTCGGCAACC AGCACAGCGA ACGGGAGCTG GAGCGCGCGC TGATCACCCG CATCGAAGAT TTTCTGCGCG CAATGGGCGG CATGTTTGCC TTCCTGGGTA GCCAATACCG GCTTGAAGTG GATGGCGACG AGTATTTCAT CGATCTGCTG CTGTTCCACC GCCGCTTGCG CTCGCTGGTG GCCATCGAAC TGAAAATCGG CAAATTCGAA CCCGAGTTTG TCGGGAAGAT GCAGTTCTAC CTGGCCGCTC TGGACGAGCA GGTTCGCCAG GACGACGAGA ACCCGTCCAT CGGCATCATC CTGTGCAAAG AAAAGAAGCG CACCATCGTC GAATATGCAC TTCGCGACGC AACGAAGCCG ATTGGCGTAG CGACTTACGC CATCACCAAG AGTCTGCCCA AGGAGTTACA GGGCCAGTTG CCTTCGCCTG AAACCATTGC GCGCCTGCTT GAAACGCTGT AG
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Protein sequence | MATRPPARRK LAPVVRETVD AQDYAALLTE IRARIQAAQY AALRAVNKEL VGLYWDIGQM IVARQQTEGW GKAVVQQLAT DLQASFPGTG GFSASNLWRM KGFFETYRDA TKLAPLVREI GWSHNLLILE RCKDAQEREF YLRMTRKFGW SKSVLAHQID NQSYEKSLLG QTNFDKALTP ALRAQAKLAV RDEYAFDFLE LGNQHSEREL ERALITRIED FLRAMGGMFA FLGSQYRLEV DGDEYFIDLL LFHRRLRSLV AIELKIGKFE PEFVGKMQFY LAALDEQVRQ DDENPSIGII LCKEKKRTIV EYALRDATKP IGVATYAITK SLPKELQGQL PSPETIARLL ETL
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