| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1840 |
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| Symbol | |
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| ID | 6286334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1929390 |
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| End bp | 1931204 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642625402 |
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| Product | copper-resistance protein, CopA family |
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| Protein accession | YP_001899408 |
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| Protein GI | 187928921 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.71414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000125697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGCA ATCGTGCAAT GGGCGTGGTG CTTCCGAACC TTCCGCGGAG GCGATTTGTG
CAAGGCTTGG CCGCCGGAGG GGTGATCGCT GGCCTGGGCT TGGGCGGGAT GCCCGCGCGG
GCGTCGCAGG CCCAGGGCAC AGCCTTTGGC ACCGCGCCCG TGCTGCGGGG CACCGAATTC
GATCTGGTGA TCGCTGAGAC CCCAGTGAAC TTTACCGGCA AGCCAGGCAT GGCGACTACC
ATCAATGGCA TGCTGCCTGG CCCAACGTTG CGGTGGCGTG AAGGTGACAC GGTCACCATC
CGGGTGACCA ACCGTCTGCC GGAGCCCACG TCAATTCATT GGCACGGCAT CATTCTGCCG
TTCCAGATGG ACGGCGTACC CGGGATCAGC TTTTCCGGCA TCGCCCCGGG CGAGACATTC
ACGTATCGTT TCAAGGTCCA GCAGAGTGGC AGTTACTGGT ACCACTCGCA CTCCGGCTTC
CAGGAAATGA CAGGACTATA TGGCGGTATC GTTATCGATC CCGCTGGCGA GGACCGCGTG
CGGGCCGATC GCGATTACAC CGTCTTGCTT TCCGACTGGA CGGACGAGGA TCCGATGCGC
GTCCTCACCA AGCTTAAGAT CCAAGGCGAC TACTACAACT ATAACCAGCC GACTGTGGTC
GATTTCTTTC GCGATGTCTC CCGTGAGGGA TGGACATCTG CCATGAACAA ACGGCAGATG
TGGAACCAGA TGCGCATGAA TCCGACCGAT TTGGCGGATC TCTCCGGCGC GACGCTGACC
TACCTCATGA ATGGCGTGAC GCCAGCGGGG AATTGGACCG GTCTATTTTC TCCAGGCCAG
ACGGTACGGT TGCGCTTCAT CAACGGCGCC GGCAACACGT TCTATGACGT TCGCGTTCCG
GGCTTGAAGA TGAAGGTAGT GCAGGTTGAC GGACAGGATA TCGAACCGGT GTCGGTCGAT
GAGTTCCGCT TTGGCCCTGG CGAGACCTGC GACGTAGTGG TCTCTCCGAC GGATGAGGCC
CACACAGTGT TCGCGCAGAC GATGGACCGG ACCGGATATG CCCGGGGCAC TCTGGCCGTG
CGCCAGGGCG TGCAAGCCCC TGTGCCAGCG GTCGACAAGG CTGAATGGCT GACGATGGCG
GATATGATGG GCGACATGGG AGGCATGTCT GGCATGTCTG GCATGTCTGG CATGTCTGGC
ATGTCTGGCA TGGACCATGG CGGCATGGCA ATGGCTCACA GCCAGCATGG AGCGATGCCG
GGCAATGCCG CAAACTCCTT GAAGGTGCCG AGCAAGAAAG CCCGTCATGC GCGTACAGAG
TACGGTCCCA GCACCGACAT GCATGTCGAT ATGGCGCGGA CCAACCTCGA CGATCCCGGC
ATAGGGCTGC GCAACAATGG GCGACGTGTG CTGGTCCTGC AGGACATGCA TACGATCGGC
GGCCCTATGG ACGCCCGCAG CCCTCAGCGC GAGGTGGAGT TACATCTGAC CGGCAATATG
GAGCGCTACG CGTGGTCGCT CGACGGAGTG GAGTTCGGCA AATCGACCCC CGTTCATTTT
CGCTATGGGG AACGTCTTCG CGTCATTCTT CACAACGATA CGATGATGAC GCACCCGATG
CACATGCATG GGATGTGGAG CGAACTTGAG GCGCCGGACG GCACATTCTT GGCGCGCCGA
CACACGATTC CGGTGCAGCC CGCGCAGCGC ATTAGCTTCC TTGTCACGGC TGACGCTCTT
GGCCGATGGG CTTGGCACTG CCATCTCATG CTTCATATGG ATGCAGGTAT GTTCCGTGAA
GTGATCGTCG CCTAA
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| Protein sequence | MRSNRAMGVV LPNLPRRRFV QGLAAGGVIA GLGLGGMPAR ASQAQGTAFG TAPVLRGTEF
DLVIAETPVN FTGKPGMATT INGMLPGPTL RWREGDTVTI RVTNRLPEPT SIHWHGIILP
FQMDGVPGIS FSGIAPGETF TYRFKVQQSG SYWYHSHSGF QEMTGLYGGI VIDPAGEDRV
RADRDYTVLL SDWTDEDPMR VLTKLKIQGD YYNYNQPTVV DFFRDVSREG WTSAMNKRQM
WNQMRMNPTD LADLSGATLT YLMNGVTPAG NWTGLFSPGQ TVRLRFINGA GNTFYDVRVP
GLKMKVVQVD GQDIEPVSVD EFRFGPGETC DVVVSPTDEA HTVFAQTMDR TGYARGTLAV
RQGVQAPVPA VDKAEWLTMA DMMGDMGGMS GMSGMSGMSG MSGMDHGGMA MAHSQHGAMP
GNAANSLKVP SKKARHARTE YGPSTDMHVD MARTNLDDPG IGLRNNGRRV LVLQDMHTIG
GPMDARSPQR EVELHLTGNM ERYAWSLDGV EFGKSTPVHF RYGERLRVIL HNDTMMTHPM
HMHGMWSELE APDGTFLARR HTIPVQPAQR ISFLVTADAL GRWAWHCHLM LHMDAGMFRE
VIVA
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