| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1746 |
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| Symbol | |
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| ID | 6288178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1840991 |
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| End bp | 1842319 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642625310 |
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| Product | integrase family protein |
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| Protein accession | YP_001899316 |
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| Protein GI | 187928829 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.526139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGCAT TGCGAGCCCA CGGCATTTCC ACACTGGCGG ACCTGACCGT GCGCGTGCCG
CGCCGGCGCC GCTGGTGGGG CGCGATCCCG GGGCTGGGGC AAGCGAGCGC GCGGCACATC
GAGGCCTTCT TCCACGCCCA TCCGCGGTTG ACGGAGCGTG CGCGTGCCCT GATCGTCGGC
GCGCCGCCAG GCGAGGTGGT CCCGTGGGAG CGGCTGAAAC TGCCCGACGA GGTGGACGGC
TCGCGAGGCA GCTTCCGGGC ACCGCGACAG GCCTGCACGC TCGACGCATC GAACGACTAC
GAAGCCGTGC AGGCCTGGCT CGCCCTGCAC GAAACCCAGA CCACGCAGCG CGCCTATCGC
AAGGAGGCGG AACGCCTGAT CCTGTGGGCG ATTATCGAGC GCGGTCGGGC GCTGTCGTCG
CTTACGACCG AGGACGCCAT CGCCTACCGC GGGTTCCTGC GGCGACCAAC TCCGCGTGAG
CGCTGGATCG GGCCACCGCG GGCACGCAGC GCGCCCGACT GGCGCCCCTT CGCACGGGGG
CTATCGGCAC GTTCGACGGC CTACGCCCTC ACGGTGCTGG GCGCCATGTT CCGATGGCTG
ATCGAGCAGC GCTATGTATT GGCCAACCCG TTTGCCGGCA TCAAAGTCCG CGGCCGCACG
CGGGTCGCGC CACTCGATAC CACACGTGGC TTTACTGAGG GCGAATGGCT GCTGGTGCGC
ACCATTGCCG ATGGCCTGGA ATGGTCGTAC GGGTGGGACG TGCCCGCAGC GCAGCGCTTG
CGCTTCATTC TCGATTTTGC CTACGCGACC GGCCTGCGGG CCAGCGAACT GGTTGGCGCG
ACGCTGGGCG ATATCCGCAC TGACGAGCGC AACGACCGCT GGCTGCACCT GGTCGGCAAA
GGTGGGCGCC CGGGAAAGGT GGCGCTACCG CCACTTGCGC GAACCGCACT CGATCAGCAT
CTTGTACAGC GCGGACTGCC GGTGACACCA GCCCGTTGGG ACCCCAGGAC ACCCTTGATC
GCCAGCCTGG AGCAGGACAG CGTCACTAAC ATCACCGGCA CCCGGCTGTG GATGGTAATG
CGGCGCTTCT TTGGCCAGGC CGCGGACATC ATCGCCGGCG ACCACCCGAC ACTCGCCGAA
AAGCTGCGCC GAGCCAGTCC CCACTGGACG CGGCATACCC ACGCTACACA CGCCCTCGCT
CGCGGCGCGG AACTGACCAC CGTGCGCGAT AACCTACGCC ACGCGTCGGT GGCCACCACC
TCGATTTACT TGCAAAGCGA CGAAGTCAAG CGGGCACACC AAATAGGTCA GGCCTTTGCC
GCTCGGTAG
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| Protein sequence | MRALRAHGIS TLADLTVRVP RRRRWWGAIP GLGQASARHI EAFFHAHPRL TERARALIVG
APPGEVVPWE RLKLPDEVDG SRGSFRAPRQ ACTLDASNDY EAVQAWLALH ETQTTQRAYR
KEAERLILWA IIERGRALSS LTTEDAIAYR GFLRRPTPRE RWIGPPRARS APDWRPFARG
LSARSTAYAL TVLGAMFRWL IEQRYVLANP FAGIKVRGRT RVAPLDTTRG FTEGEWLLVR
TIADGLEWSY GWDVPAAQRL RFILDFAYAT GLRASELVGA TLGDIRTDER NDRWLHLVGK
GGRPGKVALP PLARTALDQH LVQRGLPVTP ARWDPRTPLI ASLEQDSVTN ITGTRLWMVM
RRFFGQAADI IAGDHPTLAE KLRRASPHWT RHTHATHALA RGAELTTVRD NLRHASVATT
SIYLQSDEVK RAHQIGQAFA AR
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